From: Imputation of high-density genotypes in the Fleckvieh cattle population
Number of animals in reference and validation population | Chr | Beagle | MaCH a | findhap.f90b | Minimac c |
---|---|---|---|---|---|
50 / 747 | BTA1 | 2.67 h | 1.30 h (0.03 h / 0.30 h / 0.97 h) | 0.07 h | 0.17 h (0.03 h / 0.07 h / 0.07 h) |
BTA15 | 1.18 h | 0.68 h (0.02 h / 0.14 h / 0.52 h) | 0.04 h | 0.09 h (0.02 h / 0.04 h / 0.03 h) | |
BTA25 | 0.67 h | 0.37 h (0.01 h / 0.08 h / 0.28 h) | 0.04 h | 0.05 h (0.01 h / 0.02 h / 0.02 h) | |
100 / 697 | BTA1 | 3.93 h | 5.01 h (0.08 h / 1.11 h / 3.82 h) | 0.07 h | 0.27 h (0.08 h / 0.06 h / 0.13 h) |
BTA15 | 2.48 h | 2.72 h (0.05 h / 0.55 h / 2.12 h) | 0.05 h | 0.15 h (0.05 h / 0.03 h / 0.07 h) | |
BTA25 | 1.33 h | 1.48 h (0.03 h / 0.32 h / 1.13 h) | 0.04 h | 0.09 h (0.03 h / 0.02 h / 0.04 h) | |
200 / 597 | BTA1 | 4.49 h | 18.92 h (0.20 h / 4.31 h / 14.41 h) | 0.07 h | 0.48 h (0.20 h / 0.05 h / 0.23 h) |
BTA15 | 2.87 h | 10.06 h (0.11 h / 2.22 h / 7.73 h) | 0.05 h | 0.27 h (0.11 h / 0.03 h / 0.13 h) | |
BTA25 | 1.38 h | 5.76 h (0.06 h / 1.24 h / 4.45 h) | 0.04 h | 0.14 h (0.06 h / 0.01 h / 0.07 h) | |
400 / 397 | BTA1 | 3.73 h | 81.23 h (0.44 h / 21.97 h / 58.82 h) | 0.07 h | 1.1 h (0.44 h / 0.03 h / 0.63 h) |
BTA15 | 2.45 h | 40.16 h (0.21 h / 10.52 h / 29.43 h) | 0.05 h | 0.56 h (0.21 h / 0.02 h / 0.33 h) | |
BTA25 | 1.37 h | 28.30 h (0.11 h / 5.98 h / 22.21 h) | 0.04 h | 0.30 h (0.11 h / 0.01 h / 0.18 h) |