Skip to main content

Table 3 Average (standard deviation) Allele Origin Accuracy (AOAc) and Similarity Index (If) of haplotypes inferred for genotypes of simulated populations M and Cross.

From: Haplotype inference in crossbred populations without pedigree information

  Population AOAc If
Random-Mating    
  M   0.84 (0.05)
  Cross   0.30 (0.28)
Crossbreeding    
  M   0.88 (0.03)
  Cross 0.95 (0.02) 0.87 (0.05)
  1. Data were analysed assuming Random-Mating or Crossbreeding. Genotypes of simulated population F were included in the analyses when Crossbreeding was assumed. Analyses were run with α equal to 1. Ten replicates where simulated for each scenario. Base populations for M and F were simulated with Minor Allele Frequency equal to 0.40.