Haplotype inference in crossbred populations without pedigree information

Table 3 Average (standard deviation) Allele Origin Accuracy (AOAc) and Similarity Index (If) of haplotypes inferred for genotypes of simulated populations M and Cross.

Data were analysed assuming Random-Mating or Crossbreeding. Genotypes of simulated population F were included in the analyses when Crossbreeding was assumed. Analyses were run with α equal to 1. Ten replicates where simulated for each scenario. Base populations for M and F were simulated with Minor Allele Frequency equal to 0.40.

ISSN: 1297-9686