Table 1 Parameter set, genetic variability values and Wright F statistics considered in each evaluated scenario
From: Assessing population genetic structure via the maximisation of genetic distance
Microsatellite loci | ||||
|---|---|---|---|---|
Scenario | 1 | 2 | 3 | 4 |
Generations | 10000 | 10000 | 20 | 20 |
Subpopulation size | 100 | 100 | 20 | 20 |
Number of markers | 10 | 50 | 10 | 50 |
Number of alleles | 10 | 10 | 10 | 10 |
Genetic variability: | ||||
n a | 7.72 ± 0.14 | 7.78 ± 0.05 | 8.79 ± 0.11 | 8.66 ± 0.05 |
H O | 0.55 ± 0.02 | 0.56 ± 0.01 | 0.59 ± 0.01 | 0.60 ± 0.01 |
H S | 0.56 ± 0.02 | 0.56 ± 0.01 | 0.59 ± 0.01 | 0.60 ± 0.01 |
H T | 0.64 ± 0.02 | 0.65 ± 0.01 | 0.82 ± 0.00 | 0.83 ± 0.00 |
Wright F statistics: | ||||
F IS | 0.01 ± 0.00 | 0.00 ± 0.00 | 0.01 ± 0.01 | 0.00 ± 0.01 |
F ST | 0.13 ± 0.00 | 0.13 ± 0.00 | 0.27 ± 0.01 | 0.27 ± 0.01 |
F IT | 0.13 ± 0.01 | 0.12 ± 0.01 | 0.28 ± 0.01 | 0.28 ± 0.01 |
SNP loci | ||||
Scenario | 5 | 6 | 7 | 8 |
Generations | 1000 | 1000 | 20 | 20 |
Subpopulation size | 100 | 100 | 20 | 20 |
Number of markers | 60 | 300 | 60 | 300 |
Number of alleles | 2 | 2 | 2 | 2 |
Genetic variability: | ||||
n a | 1.53 ± 0.10 | 1.60 ± 0.01 | 2.00 ± 0.00 | 2.00 ± 0.00 |
H O | 0.19 ± 0.01 | 0.18 ± 0.00 | 0.33 ± 0.01 | 0.33 ± 0.00 |
H S | 0.19 ± 0.01 | 0.18 ± 0.00 | 0.33 ± 0.00 | 0.33 ± 0.00 |
H T | 0.22 ± 0.01 | 0.21 ± 0.00 | 0.46 ± 0.00 | 0.46 ± 0.00 |
Wright F statistics: | ||||
F IS | 0.00 ± 0.00 | 0.00 ± 0.00 | 0.01 ± 0.01 | 0.00 ± 0.00 |
F ST | 0.14 ± 0.01 | 0.14 ± 0.00 | 0.27 ± 0.01 | 0.27 ± 0.01 |
F IT | 0.14 ± 0.01 | 0.14 ± 0.00 | 0.28 ± 0.01 | 0.27 ± 0.01 |