From: Assessing population genetic structure via the maximisation of genetic distance
Scenario 2 | HIM | |||||
---|---|---|---|---|---|---|
m = 0.05 | m = 0.07 | m = 0.10 | K = 10 | 50 markers | 300 markers | |
Genetic variability: | ||||||
n a | 7.68 ± 0.04 | 7.75 ± 0.08 | 7.73 ± 0.05 | 8.03 ± 0.04 | 9.58 ± 0.03 | 1.14 ± 0.02 |
H O | 0.60 ± 0.01 | 0.61 ± 0.01 | 0.62 ± 0.01 | 0.49 ± 0.00 | 0.50 ± 0.00 | 0.02 ± 0.00 |
H S | 0.60 ± 0.01 | 0.62 ± 0.01 | 0.63 ± 0.01 | 0.50 ± 0.00 | 0.51 ± 0.00 | 0.02 ± 0.00 |
H T | 0.62 ± 0.01 | 0.63 ± 0.01 | 0.63 ± 0.01 | 0.67 ± 0.00 | 0.79 ± 0.00 | 0.05 ± 0.00 |
Wright F statistics: | ||||||
F IS | 0.00 ± 0.00 | 0.00 ± 0.00 | 0.01 ± 0.00 | 0.01 ± 0.00 | 0.01 ± 0.00 | 0.01 ± 0.00 |
F ST | 0.03 ± 0.00 | 0.02 ± 0.00 | 0.01 ± 0.00 | 0.26 ± 0.01 | 0.35 ± 0.00 | 0.50 ± 0.01 |
F IT | 0.03 ± 0.00 | 0.02 ± 0.00 | 0.02 ± 0.00 | 0.27 ± 0.01 | 0.36 ± 0.00 | 0.50 ± 0.01 |
Scenario 3 (HWD) | Scenario 6 (LD) | |||||
s = 0.3 | s = 0.5 | s = 0.7 | s = 0.9 | m = 0.01 | m = 0.1 | |
Genetic variability: | ||||||
n a | 8.45 ± 0.17 | 8.21 ± 0.08 | 7.78 ± 0.19 | 7.18 ± 0.19 | 1.95 ± 0.00 | 1.94 ± 0.00 |
H O | 0.51 ± 0.01 | 0.39 ± 0.01 | 0.23 ± 0.01 | 0.09 ± 0.01 | 0.08 ± 0.01 | 0.36 ± 0.00 |
H S | 0.60 ± 0.01 | 0.54 ± 0.01 | 0.48 ± 0.02 | 0.46 ± 0.02 | 0.09 ± 0.01 | 0.37 ± 0.00 |
H T | 0.82 ± 0.00 | 0.81 ± 0.00 | 0.81 ± 0.01 | 0.79 ± 0.01 | 0.40 ± 0.00 | 0.40 ± 0.00 |
Wright F statistics: | ||||||
F IS | 0.15 ± 0.01 | 0.29 ± 0.01 | 0.52 ± 0.01 | 0.81 ± 0.02 | 0.12 ± 0.02 | 0.02 ± 0.00 |
F ST | 0.27 ± 0.01 | 0.33 ± 0.01 | 0.40 ± 0.02 | 0.42 ± 0.02 | 0.76 ± 0.02 | 0.07 ± 0.00 |
F IT | 0.38 ± 0.01 | 0.52 ± 0.01 | 0.71 ± 0.01 | 0.89 ± 0.01 | 0.79 ± 0.02 | 0.09 ± 0.01 |