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Table 4 Modal value and fraction of replicates where K = 5 (10) in the remaining scenarios

From: Assessing population genetic structure via the maximisation of genetic distance

 

Scenario 2

HIM

 

m = 0.05

m = 0.07

m = 0.10

K = 10

50 markers

300 markers

Modal value:

      

STRUCTURE

5

5

5

9

5

5

BAPS

5

5

3

10

21

18

MGD

5

5

3

10

5

5

Replicates K = 5 (or 10):

      

STRUCTURE

1.0

1.0

0.9

(0.2)

0.6

0.7

BAPS

1.0

0.9

0.3

(0.6)

0.0

0.0

MGD

0.9

0.5

0.2

(1.0)

1.0

1.0

 

Scenario 3 (HWD)

Scenario 6 (LD)

 

s = 0.3

s = 0.5

s = 0.7

s = 0.9

m = 0.01

m = 0.1

Modal value:

      

STRUCTURE

5

5

5

3

5

4

BAPS

11

10

15

15

9

6

MGD

5

5

5

3

5

5

Replicates K = 5:

      

STRUCTURE

0.8

0.5

0.7

0.3

0.8

0.1

BAPS

0.0

0.0

0.0

0.0

0.0

0.0

MGD

0.8

0.8

0.7

0.1

1.0

0.5

  1. See Table 2 for the explanation of scenarios