Table 2 Average (standard error) of number of polymorphic markers (nSNP), LD between adjacent markers (r2), number of QTL (nQTL), and average coefficient of determination of QTL (R2).
Situation | nSNP | r2 | nQTL | R2 |
|---|---|---|---|---|
low nQTL | 1431 (5.3) | 0.048 (< 0.001) | 35 (0.2) | 0.806 (0.003) |
low nQTL MAF > 0.10 | 374 (2.1) | 0.145 (0.002) | 35 (0.2) | 0.715 (0.004) |
int. nQTL | 1431 (5.3) | 0.048 (< 0.001) | 172 (1.0) | 0.811 (0.002) |
int. nQTL MAF > 0.10 | 374 (2.1) | 0.145 (0.002) | 172 (1.0) | 0.717 (0.002) |
high nQTL | 1431 (5.3) | 0.048 (< 0.001) | 343 (2.0) | 0.811 (0.001) |
high nQTL MAF > 0.10 | 374 (2.1) | 0.145 (0.002) | 343 (2.0) | 0.717 (0.001) |