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Table 4 Accuracy of the estimated breeding values (±SE) using SNP sequence data using two different methods and two alternative reference populations

From: Different models of genetic variation and their effect on genomic evaluation

    Method
  No. QTL Reference population Bayes B gBLUP
QTL 100 1 0.87 (0.009) 0.58 (0.014)
  1000 1 0.67 (0.012) 0.60 (0.017)
  10,000 1 0.58 (0.013) 0.58 (0.015)
  IM 1 0.54 (0.015) 0.55 (0.012)
QTL 100 2 0.81 (0.021) 0.39 (0.020)
  1000 2 0.53 (0.017) 0.35 (0.013)
  10,000 2 0.38 (0.012) 0.34 (0.015)
  IM 2 0.34 (0.012) 0.35 (0.017)