Table 4 Accuracy of the estimated breeding values (±SE) using SNP sequence data using two different methods and two alternative reference populations
From: Different models of genetic variation and their effect on genomic evaluation
| Â | Â | Â | Method | |
|---|---|---|---|---|
| Â | No. QTL | Reference population | Bayes B | gBLUP |
QTL | 100 | 1 | 0.87 (0.009) | 0.58 (0.014) |
| Â | 1000 | 1 | 0.67 (0.012) | 0.60 (0.017) |
| Â | 10,000 | 1 | 0.58 (0.013) | 0.58 (0.015) |
| Â | IM | 1 | 0.54 (0.015) | 0.55 (0.012) |
QTL | 100 | 2 | 0.81 (0.021) | 0.39 (0.020) |
| Â | 1000 | 2 | 0.53 (0.017) | 0.35 (0.013) |
| Â | 10,000 | 2 | 0.38 (0.012) | 0.34 (0.015) |
| Â | IM | 2 | 0.34 (0.012) | 0.35 (0.017) |