Assessment of alternative genotyping strategies to maximize imputation accuracy at minimal cost

Table 5 Summary of informative SNP

	Percentage of the genome surrounded by informative SNP¹± SD			Average distance in Mb between adjacent informative SNP ± SD
	Paternal	Maternal	Average²	Paternal	Maternal	Average²
H	99.29 ± 0.81	98.96 ± 1.14	99.12 ± 1.00	0.22 ± 1.08	0.25 ± 1.25	0.23 ± 1.16
L6k	98.47 ± 1.01	98.02 ± 1.20	98.24 ± 1.13	1.31 ± 2.90	1.43 ± 3.31	1.37 ± 3.10
L3k	97.67 ± 1.70	96.95 ± 1.94	97.31 ± 1.86	2.46 ± 4.31	2.63 ± 4.79	2.54 ± 4.54
L384	88.75 ± 8.16	83.41 ± 9.69	86.08 ± 9.33	18.36 ± 18.19	18.99 ± 17.70	18.66 ± 17.96

¹ Informative SNP: SNP having paternal and maternal alleles inheritance established; genome surrounded by informative SNP means that on one chromosome, the largest section of genome that has informative SNP on both sides.
²The average of paternal and maternal.

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