Top-20 associated windowsa | SNP with highest model frequency within window | ||||||||
---|---|---|---|---|---|---|---|---|---|
ECAb | Position (Mb)c | % of genetic variance explainedd | Number of SNP | % of iterations where variance explained > 0.04%e | SNP name | SNP position (bp) | Model frequencyf | Allele frequencyg | |
 |  |  |  |  |  |  |  | Cases | Controls |
1 | 7 | 0.215 | 25 | 4.5 | BIEC2 _2768 | 7,759,159 | 0.94 | 0.69 | 0.46 |
3 | 35 | 0.392 | 18 | 5.4 | BIEC2 _776785 | 35,897,049 | 0.45 | 0.46 | 0.26 |
4 | 24 | 0.161 | 17 | 2.7 | BIEC2 _855840 | 24,611,718 | 0.32 | 0.51 | 0.33 |
4 | 43 | 0.180 | 18 | 4.0 | BIEC2 _861849 | 43,590,939 | 0.51 | 0.69 | 0.49 |
5 | 26 | 0.176 | 20 | 3.2 | BIEC2 _898729 | 26,364,893 | 0.52 | 0.60 | 0.38 |
6 | 6 | 0.166 | 43 | 4.4 | BIEC2 _937490 | 6,127,639 | 0.69 | 0.54 | 0.30 |
7 | 55 | 0.179 | 24 | 3.8 | BIEC2 _1001715 | 55,888,542 | 0.36 | 0.35 | 0.18 |
9 | 78 | 0.182 | 30 | 3.9 | BIEC2 _1106244 | 78,254,394 | 0.44 | 0.43 | 0.25 |
11 | 40 | 0.266 | 21 | 3.5 | BIEC2 _152809 | 40,721,405 | 1.30 | 0.67 | 0.42 |
15 | 19 | 0.162 | 23 | 3.7 | BIEC2 _293503 | 19,944,954 | 0.66 | 0.55 | 0.34 |
15 | 20 | 0.211 | 22 | 3.1 | BIEC2 _293623 | 20,074,216 | 1.04 | 0.68 | 0.44 |
15 | 32 | 0.142 | 23 | 3.2 | BIEC2 _301468 | 32,220,117 | 0.31 | 0.59 | 0.41 |
15 | 33 | 0.381 | 32 | 4.9 | BIEC2-301721 | 33,565,370 | 2.23 | 0.70 | 0.42 |
18 | 32 | 0.179 | 27 | 3.9 | BIEC2 _431445 | 32,561,292 | 0.69 | 0.54 | 0.34 |
19 | 15 | 0.186 | 24 | 3.5 | BIEC2 _430270 | 15,644,656 | 0.45 | 0.54 | 0.35 |
19 | 21 | 0.151 | 26 | 3.3 | BIEC2 _431289 | 21,754,514 | 0.33 | 0.75 | 0.57 |
20 | 30 | 0.162 | 17 | 2.2 | BIEC2 _528135 | 30,619,697 | 0.87 | 0.78 | 0.53 |
23 | 4 | 0.159 | 27 | 3.4 | BIEC2 _637804 | 4,466,955 | 0.49 | 0.74 | 0.55 |
X | 59 | 0.658 | 29 | 7.9 | BIEC2 _1126534 | 59,703,839 | 1.04 | 0.58 | 0.33 |
X | 60 | 0.282 | 29 | 3.6 | BIEC2 _1126713 | 60,238,370 | 1.32 | 0.59 | 0.33 |