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Table 1 Breeds, breed acronyms and breed means and standard deviations for different indicators of genetic diversity

From: Genetic structure, relationships and admixture with wild relatives in native pig breeds from Iberia and its islands

Breed

Acronym

MNA

NE

Rt

He

Ho

FISa

DHWE

Celta

CEL

4.54

3.04

4.00

0.596

0.496

0.171

0

(1.79)

(1.43)

(1.58)

(0.047)

(0.021)

(0.078/0.214)**

Chato Murciano

CHM

4.58

2.11

3.18

0.464

0.395

0.149

2

(2.04)

0.71)

(1.12)

(0.044)

(0.014)

(0.089/0.190)**

Entrepelado

ENT

6.21

2.85

3.84

0.564

0.543

0.036

1

(2.48)

(1.15)

(1.28)

(0.051)

(0.012)

(−0.007/0.066)

Euskal Txerria

ETX

4.04

1.95

2.79

0.393

0.389

0.010

2

(1.99)

(0.84)

(1.21)

(0.052)

(0.013)

(−0.046/0.059)

Lampiño

LAM

6.08

2.92

4.07

0.573

0.533

0.070

3

(2.99)

(1.46)

(1.65)

(0.048)

(0.013)

(0.007/0.108)*

Manchado de Jabugo

MAJ

3.38

1.96

2.75

0.388

0.397

−0.021

1

(1.64)

(0.94)

(1.23)

(0.051)

(0.016)

(−0.085/0.016)

Negro Canario

NCA

5.83

2.64

3.87

0.550

0.487

0.116

3

(1.86)

(1.01)

(1.14)

(0.046)

(0.014)

(0.053/0.160)**

Negro de Formentera

NFO

3.88

1.91

3.08

0.421

0.351

0.170

1

(1.62)

(0.67)

(1.11)

(0.044)

(0.022)

( 0.028/0.241)*

Negro de los Pedroches

NPE

4.21

2.58

3.61

0.561

0.554

0.012

1

(1.41)

(1.02)

(1.16)

(0.040)

(0.020)

(−0.102/0.082)

Negro Mallorquín

NMA

4.63

2.51

3.81

0.560

0.514

0.084

0

(1.47)

(1.01)

(1.11)

(0.034)

(0.023)

(−0.023/0.123)

Retinto

RET

6.38

2.64

3.83

0.545

0.508

0.068

3

(2.81)

(1.05)

(1.28)

(0.047)

(0.011)

(0.028/0.097)**

Torbiscal

TOR

5.00

2.60

3.50

0.527

0.465

0.118

4

(2.50)

(1.17)

(1.41)

(0.051)

(0.013)

(0.067/0.152)**

Spanish Wild Boar

SWB

6.50

3.65

4.67

0.592

0.561

0.103

1

(2.27)

(2.36)

(2.14)

(0.046)

(0.017)

(0.066/0.129)**

Alentejano

ALE

5.88

3.02

4.07

0.567

0.532

0.063

3

(2.49)

(1.33)

(1.57)

(0.055)

(0.013)

(0.013/0.096)*

Bisaro

BIS

5.58

3.34

4.33

0.632

0.549

0.132

1

(2.26)

(1.56)

(1.44)

(0.040)

(0.015)

(0.071/0.165)**

Malhado de Alcobaça

MAL

3.67

2.23

3.05

0.522

0.514

0.015

1

(1.09)

(0.63)

(0.72)

(0.031)

(0.017)

(−0.049/0.050)

Portuguese Wild Boar

PWB

7.04

3.00

4.44

0.616

0.553

0.055

1

(3.80)

(1.44)

(1.55)

(0.050)

(0.012)

(−0.010/0.087)

Mean

 

5.14

2.64

3.71

0.534

0.491

0.078

1.65

  

±2.15

±1.16

±0.57

±0.046

±0.016

(0.060/0.096)

±1.17

  1. aStatistical significance of FIS estimate represented as: *P < 0.05 and **P < 0.01; MNA number of alleles/locus; NE effective number of alleles/locus, R t allelic richness per locus corrected for breed sample size, H e expected heterozygosity, H o observed heterozygosity, F IS within-population deficit in heterozygosity and confidence interval, DHWE number of loci showing deviations from Hardy-Weinberg equilibrium.