Skip to main content

Table 1 RNASE5 pathway gene set and characteristics of the different SNP regions

From: Genes of the RNASE5 pathway contain SNP associated with milk production traits in dairy cattle

Gene Chr SNP region Nb SNP Number of SNP significant
   Start Stop   Protein yield Protein % Fertility Fat yield Fat % Milk yield
ACTA2 26 10578865 11592811 26 7   5 6 2 6
ACTN2 28 7393500 8441168 16 2    1 2 2
FBLN-1 5 122206254 123286509 22 4 10 5    3
FSLP-3 7 41906484 42911309 20 3 9 1 2   
FST 20 26797134 27802564 13 2 8   1 4 1
HIF1 10 75457880 76502552 17 1 1 2    3
PLEC2 14 190799 1212951 16 16 15 3 15 16 16
RFX7 10 54530392 55670964 25 2 2    1  
RNASE4/5 10 25298775 26315348 23 5    1   4
RPL22L1 1 98326431 99330809 17 4 5 2 1   1
SP140 2 121890759 122935785 16 2 7    2 4
Total nb SNP    211 48 57 18 27 27 40
\