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Table 1 RNASE5 pathway gene set and characteristics of the different SNP regions

From: Genes of the RNASE5 pathway contain SNP associated with milk production traits in dairy cattle

Gene

Chr

SNP region

Nb SNP

Number of SNP significant

  

Start

Stop

 

Protein yield

Protein %

Fertility

Fat yield

Fat %

Milk yield

ACTA2

26

10578865

11592811

26

7

 

5

6

2

6

ACTN2

28

7393500

8441168

16

2

  

1

2

2

FBLN-1

5

122206254

123286509

22

4

10

5

  

3

FSLP-3

7

41906484

42911309

20

3

9

1

2

  

FST

20

26797134

27802564

13

2

8

 

1

4

1

HIF1

10

75457880

76502552

17

1

1

2

  

3

PLEC2

14

190799

1212951

16

16

15

3

15

16

16

RFX7

10

54530392

55670964

25

2

2

  

1

 

RNASE4/5

10

25298775

26315348

23

5

  

1

 

4

RPL22L1

1

98326431

99330809

17

4

5

2

1

 

1

SP140

2

121890759

122935785

16

2

7

  

2

4

Total nb SNP

  

211

48

57

18

27

27

40

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Genetics Selection Evolution

ISSN: 1297-9686