Analysis of conservation priorities of Iberoamerican cattle based on autosomal microsatellite markers

Ginja, Catarina; Gama, Luís T; Cortes, Óscar; Delgado, Juan Vicente; Dunner, Susana; García, David; Landi, Vincenzo; Martín-Burriel, Inmaculada; Martínez-Martínez, Amparo; T Penedo, M Cecília; Rodellar, Clementina; Zaragoza, Pilar; Cañon, Javier

doi:10.1186/1297-9686-45-35

Genetics Selection Evolution

Table 1 Within-breed genetic diversity of Creole (Cr) cattle breeds

From: Analysis of conservation priorities of Iberoamerican cattle based on autosomal microsatellite markers

Group	Country	Breed name	Acron	FAO risk status	N	H_o±SD	H_e±SD	MNA±SD	R_t±SD
Cr 1	Argentina	Cr Argentino	CRA	Unknown	50	0.673±0.110	0.678±0.101	6.26±1.66	4.00±0.80
Cr 1	Argentina	Cr Patagonico	PAT	Unknown	35	0.629±0.124	0.670±0.108	5.32±1.57	3.84±0.84
Cr 1	Brazil	Caracú	CAR	Not at risk	47	0.733±0.101	0.711±0.095	6.74±1.73	4.32±0.81
Cr 1	Uruguay	Cr Uruguayo	CRU	Endangered maintained	43	0.668±0.107	0.674±0.085	5.63±1.67	3.97±0.78
Cr 2	Colombia	Blanco Orejinegro	BON	Not at risk	25	0.737±0.127	0.697±0.100	5.74±1.76	4.10±0.82
Cr 2	Colombia	Hartón del Valle	HVA	Not at risk	22	0.783±0.130	0.783±0.070	7.74±1.73	5.24±0.92
Cr 2	Colombia	Lucerna	LUC	Not at risk	24	0.673±0.152	0.717±0.108	6.63±2.06	4.69±1.11
Cr 2	Paraguay	Pampa Chaqueño	PCH	Endangered	50	0.750±0.091	0.771±0.074	8.11±1.79	5.05±0.92
Cr 3	Colombia	Costeño con Cuernos	CCC	Endangered maintained	25	0.692±0.168	0.671±0.135	5.26±1.37	3.94±0.95
Cr 3	Colombia	Romosinuaño	RMS	Not at risk	25	0.651±0.140	0.669±0.132	5.11±1.59	3.94±1.00
Cr 4	Panama	Guabalá	GUA	Not reported	25	0.629±0.218	0.660±0.196	5.79±1.96	4.10±1.30
Cr 4	Panama	Guaymí	GYM	Not reported	36	0.735±0.082	0.756±0.075	7.79±1.65	4.93±0.91
Cr 5	Colombia	Sanmartinero	SMA	Not at risk	25	0.692±0.124	0.721±0.079	6.37±1.16	4.39±0.73
Cr 5	Mexico	Cr Baja California	CBC	Not at risk	21	0.742±0.158	0.760±0.082	7.05±1.58	4.98±0.98
Cr 5	Mexico	Cr Chihuahua	CHU	Unknown	19	0.719±0.168	0.777±0.080	6.68±1.49	5.14±0.95
Cr 5	Mexico	Cr Nayarit	CNY	Not at risk	24	0.749±0.121	0.788±0.077	7.74±1.94	5.25±0.89
Cr 5	Mexico	Cr Poblano	CPO	Unknown	43	0.693±0.108	0.774±0.076	8.37±2.01	5.07±1.01
Cr 5	USA	Texas Longhorn	TLH	Not at risk	80	0.707±0.117	0.740±0.111	8.05±2.46	4.78±1.13
Cr 6	Colombia	Caqueteño	CAQ	Critical	25	0.780±0.147	0.787±0.075	7.58±1.57	5.22±0.97
Cr 6	Colombia	Chino Santandereano	CHS	Unknown	25	0.726±0.091	0.776±0.055	7.32±1.73	5.03±0.80
Cr 6	Colombia	Cr Casanareño	CAS	Not at risk	35	0.739±0.414	0.766±0.078	8.00±1.65	n
Cr 6	Colombia	Velasquez	VEL	Unknown	25	0.730±0.122	0.769±0.069	6.79±1.44	4.92±0.87
Cr 6	Cuba	Cr Cubano	CUB	Not at risk	50	0.793±0.123	0.761±0.080	7.58±2.36	4.92±1.17
Cr 6	Cuba	Siboney	SIB	Unknown	50	0.746±0.172	0.762±0.116	8.05±2.30	5.05±1.08
Cr 6	Ecuador	Cr Ecuatoriano	ECU	Not at risk	12	0.732±0.174	0.772±0.100	6.63±2.11	5.23±1.22
Cr 6	Mexico	Cr Chiapas	CHI	Unknown	30	0.741±0.145	0.782±0.091	7.84±1.57	5.23±0.89
Cr 6	Paraguay	Pilcomayo	PIL	Unknown	36	0.764±0.125	0.769±0.096	7.53±1.74	5.07±1.02
Total	15	27			907	0.719±0.053	0.739±0.049	6.95±1.52	4.71±1.1

Summary statistics of the genetic diversity of 27 Creole breeds; geographical breed group, country of origin, breed names and acronyms (acron), FAO risk status, sample sizes (N), observed (H_o) and unbiased expected (H_e) heterozygosities, mean number of alleles (MNA), and allelic richness corrected for sample size (R_t) are shown; SD = standard deviation; n = not applicable.

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ISSN: 1297-9686

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