Skip to main content

Table 2 Details on chromosomes in the analyses

From: Error rate for imputation from the Illumina BovineSNP50 chip to the Illumina BovineHD chip

BTA

n_50k

n_HD

fr_unm

Length(cM)

n50k/cM

1

2571

37791

0.0680

158.32

16.24

6

1989

29805

0.0667

119.45

16.65

11

1696

27398

0.0619

107.28

15.81

14

1376

17269

0.0797

84.63

16.26

20

1164

18381

0.0633

71.99

16.17

29

793

12690

0.0625

51.50

15.40

  1. For each chromosome: number of markers that were not masked in validation animals (n_50k), total number of markers (n_HD), fraction unmasked (fr_unm), length of chromosome in centiMorgan, and average number of unmasked markers per cM (n50k/cM).