Figure 7

Example of paternal strand blocking structure built from a phased half-sib family with 23 individuals using real data genotyped on the 50K Ovine Illumina array. A: hsphase; B: AlphaPhase with pedigree; C: pedigree free AlphaPhase; D: BEAGLE; E: PedPhase; red and blue colours indicate the sire’s strands inherited by each offspring, obtained by comparing the phased data with the sire’s phased haplotypes, as inferred by the respective methods (the sire’s genotypes were part of the dataset); empty spaces indicate unknown strand or haplotype.