Skip to main content

Table 1 Sampling information and basic parameters of genetic diversity for nine goat breeds (13 microsatellite markers)

From: Investigation of the genetic diversity of domestic Capra hircus breeds reared within an early goat domestication area in Iran

 

Allelic diversity

Genetic diversity

Country

Province

Population name

Code

N

NF

TNA

NEA (SD)

MNA (SD)

Ar

NPA (Freq. range)

HE(SD)

HO(SD)

F IS

Iran

Gilan

Taleshi

TAL

34

17

98

3.75 (1.34)

7.54 (3.26)

5.88

8 (0.015-0.045)

0.710 (0.030)

0.710 (0.021)

0.001

 

Ardebil

Khalkhali

KHL

41

18

95

4.00 (1.68)

7.31 (3.12)

5.78

1 (0.012)

0.713 (0.035)

0.696 (0.020)

0.024

 

Isfahan

Naini

NAI

39

10

97

3.61 (1.69)

7.46 (2.30)

5.64

4 (0.013-0.053)

0.670 (0.043)

0.622 (0.022)

0.072**

 

Fars

Turki-Ghashghaei

TUR

38

11

104

3.58 (1.53)

8.00 (2.24)

5.99

3 (0.013-0.015)

0.681 (0.036)

0.644 (0.021)

0.055*

 

Fars

Abadeh

ABD

30

8

87

3.93 (1.47)

6.69 (2.10)

5.83

1 (0.019)

0.720 (0.035)

0.602 (0.026)

0.166***

 

Kurdestan

Markhoz

MKZ

38

9

83

3.52 (1.50)

6.38 (2.50)

5.18

4 (0.013-0.129)

0.658 (0.050)

0.615 (0.022)

0.067**

 

Khuzestan

Najdi

NAJ

20

5

61

2.65 (1.06)

4.69 (1.65)

4.25

0

0.586 (0.046)

0.611 (0.031)

-0.045

Pakistan

Punjab

Teddy

TED

38

-

77

3.39 (1.16)

5.92 (1.44)

4.91

4 (0.026-0.132)

0.678 (0.036)

0.655 (0.021)

0.035

 

Punjab

Pahari

PAH

39

-

79

3.12 (1.31)

6.08 (2.29)

4.79

0

0.625 (0.047)

0.612 (0.021)

0.021

 

Mean

     

3.50 (1.41)

6.67 (2.32)

6.17

 

0.671 (0.040)

0.641 (0.023)

 
  1. N = sample size; NF = number of sampled flocks; TNA = total number of alleles; NEA = mean number of effective alleles; SD = standard deviation; MNA, mean number of alleles; Ar = allelic richness based on a minimum sample size of 12 diploid individuals; NPA = number of private alleles; HE = expected heterozygosity; HO = observed heterozygosity; FIS = population inbreeding coefficient; significant values are as indicated: *P < 0.05, **P < 0.01, ***P < 0.001.