Figure 7

Overall prediction of imputation reliability versus observed imputation reliability. Overall prediction of imputation reliability (${\mathit{r}}_{\mathit{\text{total}}}^2$, Ne = 1000) plotted against observed imputation reliability for imputation from the BovineHD panel to whole-genome sequence data on BTA1 for three scenarios (S40, S60, and S80); SNPs were grouped in bins of 1000 SNPs with similar ${\mathit{r}}_{\mathit{\text{total}}}^2$.