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Table 1 Number of animals selected for dense genotyping shared by lists obtained using methods KIN, CON, SRS, MCA and MCG for T= 200 and Ne =100

From: Prioritizing animals for dense genotyping in order to impute missing genotypes of sparsely genotyped animals

List

KIN

CON

SRS

MCA

CON

4

   

SRS

20

20

  

MCA

6

1

80

 

MCG-50

9.8

5.1

93.7

121.6

MCG-100

9.6

4.9

89.3

111.0

MCG-200

8.9

4.3

82.3

100.9

  1. Results for KIN, CON, SRS and MCA do not depend on MAF threshold and D. For MCG schemes, results vary according to the sparsity of the genotyping, D, and the values shown are the mean numbers shared over replicates when MAF ≥ 0.05. The mean standard error of the shared number between MCG lists and others are less than 0.15.