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Table 1 Number of SNPs used after editing (MAF > 0.01, average GC score > 0.60)

From: Genomic relationships based on X chromosome markers and accuracy of genomic predictions with and without X chromosome markers

Marker data

Autosomes

X chromosome

PARa

X-specific

54K

43 314

133

694

LD (7K)

6458

25

188

  1. aPAR: pseudo-autosomal region on the X chromosome.