Figure 5
From: The utility of low-density genotyping for imputation in the Thoroughbred horse
The correlation between true and imputed genotypes by SNP. a) Plotted against the proportion of correctly imputed genotypes; b) Plotted against the proportion of correctly imputed genotypes, scaled by the proportion expected from random imputation. Black = SNPs with MAF ≥ 0.40; blue = SNPs with 0.30 ≤ MAF < 0.40; green = SNPs with 0.20 ≤ MAF < 0.30; yellow = SNPs with 0.10 ≤ MAF < 0.20; red = SNPs with MAF < 0.10; data for ECA1 and 1K panel.