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Table 3 Correlations between pedigree and genomic inbreeding coefficients in Holstein and Jersey populations

From: Identification of genomic regions associated with inbreeding depression in Holstein and Jersey dairy cattle

 

Pedigree

GRM_F1

Homozygosity2

ROH_F3

Pedigree

-

0.294

0.45

0.53

GRM_F

0.26

-

0.72

0.65

Homozygosity

0.41

0.66

-

0.90

ROH_F

0.51

0.62

0.91

-

  1. GRM_F1: the diagonal of the GRM -1; Homozygosity2: the proportion of the genome that is homozygous (homozygosity); ROH_F3: runs of homozygosity of 50 SNPs or more; 4Correlations in the Holstein population are above the diagonal and correlations in the Jersey population are below the diagonal.