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Table 10 Estimated mixing proportions (Pr) and genomic prediction accuracy from BayesR, emBayesR and GBLUP with the HD_Mix_45 and HD_One_45 datasets

From: A computationally efficient algorithm for genomic prediction using a Bayesian model

HD_Mix_45 (h 2  = 0.45)

 

Pr

Accuracy

True

[0.9950 0.0017 0.0016 0.0017]

 

BayesR

[0.9861 0.0127 0.0004 0.0008]

0.97

emBayesR

[0.9852 0.0136 0.0003 0.0009]

0.97

GBLUP

-

0.67

HD_One_45 (h 2  = 0.45)

 

Pr

Accuracy

True

[0 0 0 1]

 

BayesR

[0.722 0.2621 0.0115 0.0044]

0.80

emBayesR

[0.012 0.986 0.0007 0.0013]

0.80

GBLUP

-

0.78