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Table 5 Estimated mean squared errors (MSE), power, and false discovery rates (FDR) of detection methods across simulation factors

From: A comparison of methods for whole-genome QTL mapping using dense markers in four livestock species

Method

MSE

Power

FDR

BayesC*

0.22

0.36

0.007

EMMA**

0.21

0.36

0.006

LDLA***

0.39

0.26

0.017

  1. *statistic = likelihood ratio test corrected by Bonferroni; **statistic = t-statistic corrected by Bonferroni; ***statistic = Bayes factor; standard errors = 0.02 for MSE, 0.005 for power, and 0.0005 for FDR.
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Genetics Selection Evolution

ISSN: 1297-9686