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Table 5 Estimated mean squared errors (MSE), power, and false discovery rates (FDR) of detection methods across simulation factors

From: A comparison of methods for whole-genome QTL mapping using dense markers in four livestock species

Method MSE Power FDR
BayesC* 0.22 0.36 0.007
EMMA** 0.21 0.36 0.006
LDLA*** 0.39 0.26 0.017
  1. *statistic = likelihood ratio test corrected by Bonferroni; **statistic = t-statistic corrected by Bonferroni; ***statistic = Bayes factor; standard errors = 0.02 for MSE, 0.005 for power, and 0.0005 for FDR.