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Table 2 Summary statistics of haploblock structure across different populations

From: Linkage disequilibrium in crossbred and pure line chickens

Statistics

Population 1

B

C

D

fBCD

Median block size (kb)

30.8

37.2

29.6

25.7

Maximum block size (kb)

3521.9

3527.6

4226.0

2737.2

Genome coverage (Mb)2

446.7

485.8

401.4

229.0

TSNPs3

26293

25720

23763

13375

BSNPs (%)4

70.2

70.7

62.2

30.6

Mean ± SD nBSNPs5

3.5 ± 3.4

4.2 ± 4.6

3.5 ± 3.9

2.6 ± 2.1

Max nBSNPs6

86

89

118

86

  1. 1B: line B; C: line C; D: Line D; fBCD: field crossbred chickens; 2genome coverage with all haploblocks; 3total number of SNPs that form haploblocks; 4percentage of SNPs that form haploblocks; 5mean and standard deviation of number of SNPs that form haploblocks; 6maximum number of SNPs that form haploblocks.
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Genetics Selection Evolution

ISSN: 1297-9686