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Table 1 Number of animals genotyped before and after quality control

From: Relative extended haplotype homozygosity signals across breeds reveal dairy and beef specific signatures of selection

Breed

Total genotyped

ED- 5% misAN

ED-REPL

ED- MEND

Cleaned

HOL

2179

40

31

5

2093

BRW

775

6

16

4

749

SIM

493

6

6

2

479

MAR

485

37

38

-

410

PIE

379

5

10

-

364

  1. Total number of animals genotyped and number of animals removed after quality control analysis; HOL = Holstein, BRW = Italian Brown, SIM = Simmental, MAR = Marchigiana, PIE = Piedmontese, ED- 5% misAN = number of animals excluded with call rates < 95%, ED-REPL = number of animals excluded because they are replicates, ED- MEND = number of animals excluded with Mendelian errors > 0.2%.
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Genetics Selection Evolution

ISSN: 1297-9686