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Table 5 Number of significant epistatic interactions ( P< 10 −5 ) between each of the 28 lead SNPs and each of the other remaining 729 067 SNPs for each trait

From: Non-additive genetic variation in growth, carcass and fertility traits of beef cattle

Trait 2 Chromosome number and position of the 28 lead SNPs 1
  20 14 5 6 26 25 10 7 29 3 17 13 2 25 6 19 17 8 4 13 12 9 15 23 21 21 9 7
  49 25 48 40 28 3.7 92 99 45 80 25 35 25 15 13 25 61 59 78 66 48 18 58 44 0.9 19 101 93
PW_hip 29 24 17 10 4 48 2 25 3 2 3 5 9 39 16 0 34 11 32 6 5 3 1 2 14 3 7 38
X_hip 3 11 22 5 0 14 1 21 24 1 5 9 14 75 7 1 4 20 25 66 2 2 2 7 26 1 0 2
HUMP 0 13 0 201 14 20 6 22 15 0 1 6 0 0 1 8 0 14 28 0 0 24 0 0 1 0 1 1
PW_lwt 39 153 49 3 5 4 18 11 18 10 6 7 7 4 4 18 22 18 17 9 0 6 2 0 26 34 2 8
X_lwt 140 10 33 6 5 389 6 8 8 3 2 13 48 1 31 25 3 4 10 4 17 1 3 5 97 13 9 31
RFI 10 23 9 36 17 19 184 6 28 23 0 12 3 67 5 12 10 20 35 13 0 12 13 0 7 4 25 17
PWIGF 0 28 8 0 7 5 2 12 8 16 3 1 3 2 21 1 1 8 9 12 0 18 4 26 19 14 2 0
CP8 2 14 23 0 4 9 6 3 23 6 6 6 115 6 5 1 0 13 64 7 7 9 2 4 21 2 0 1
CRIB 3 4 31 0 53 8 1 0 42 9 0 3 4 1 0 2 26 36 13 16 11 3 2 1 28 0 109 0
CIMF 57 6 36 0 71 0 2 1 0 15 49 20 3 34 1 41 21 24 0 0 48 6 111 6 13 30 12 113
CRBY 19 9 20 12 11 15 7 0 16 1 0 0 31 0 2 6 9 48 5 1 32 5 0 7 3 4 10 16
LLPF 2 12 41 11 4 28 10 4 27 1 6 6 12 15 29 6 5 32 14 5 3 7 6 7 28 8 11 3
SC12 0 7 0 12 64 28 13 16 10 75 33 23 3 0 23 1 0 75 9 15 0 10 7 0 34 0 6 2
PNS24 0 6 0 14 2 12 12 6 6 11 2 0 10 566 0 5 0 9 5 0 501 23 4 0 29 12 3 0
AGECL 1 13 11 35 1 2 29 3 0 1 4 5 3 4 0 0 3 13 2 83 31 3 0 0 0 1 5 18
PPAI 1 6 4 14 1 26 21 2 1 13 53 20 4 1 19 0 18 3 71 11 0 10 6 2 58 0 196 1
  1. 1Numbers in bold are chromosome numbers and numbers in italics are positions in Mb; 2trait abbreviations are in Table 1.