Table 4 Description of SNPs significantly associated with meat quality traits in the meta-analysis of four pig populations (Erhualian, DLY, F 2 and Sutai) 1
Traits | Peak SNP | No. | Chr | Pos (bp) | Nearest genes | P -value |
|---|---|---|---|---|---|---|
LM_pH24h | ss131233621 | 1 | 3 | 136 625 292 | ID2 | 3.63E-06 |
LM_pH24h | ss107835446 | 2 | 7 | 115 457 433 | ENSSSCG00000018967 | 9.39E-06 |
LM_pH24h | ss131101693 | 1 | X | 141 793 169 | HAUS7 | 2.46E-05 |
LM_DripEZ_24h | ss131380751 | 1 | 8 | 143 349 693 | WDFY3 | 1.20E-05 |
LM_ColorM_L24h | ss131499292 | 2 | 14 | 118 515 539 | PI4K2A | 1.91E-05 |
LM_ColorM_a24h | ss131529154 | 1 | 15 | 133 970 166 | CDK5R2 | 5.62E-06 |
LM_ColorM_b24h | ss131233621 | 1 | 3 | 136 625 292 | ID2 | 1.04E-05 |
LM_ColorM_b24h | ss107823551 | 1 | 7 | 94 809 941 | ENSSSCG00000002270 | 2.12E-05 |
LM_ColorScore_24h | ss131508309 | 1 | 14 | 18 052 581 | ENSSSCG00000021805 | 1.16E-05 |
LM_MoistureContent | ss131289803 | 1 | 5 | 68 572 410 | PARP11 | 2.52E-07 |
LM_MoistureContent | ss107806758 | 4 | 7 | 35 177 641 | SPDEF | 5.87E-06 |