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Table 1 Name of the breeds, breed acronyms, sample size before (n-PreQC) and after (n-PostQC) genotyping quality control procedures, expected heterozygosity (HE), observed heterozygosity (HO), Wright’s inbreeding coefficient (FIS), and proportion of polymorphic SNPs (PN)

From: Genetic diversity of Italian goat breeds assessed with a medium-density SNP chip

Breed name Breed code n-PreQC n-PostQC HE HO FIS PN
Valdostana VAL 24 24 0.37 0.36 0.05 98.20
Camosciata delle Alpi CAM 31 30 0.40 0.40 0.02 99.70
Saanen SAA 24 24 0.41 0.41 −0.001 99.66
Orobica ORO 24 23 0.35 0.35 0.01 96.89
Bionda dell’Adamello BIO 24 24 0.40 0.40 0.02 99.45
Valpassiria or Passeirer Gebirgziege VPS 24 24 0.40 0.40 0.02 99.41
Ciociara Grigia CGI 19 19 0.40 0.39 0.06 99.29
Di Teramo TER 23 23 0.35 0.38 −0.06 95.13
Dell’Aspromonte ASP 24 24 0.40 0.38 0.06 99.38
Nicastrese NIC 25 24 0.40 0.38 0.07* 99.37
Argentata dell’Etna ARG 25 24 0.41 0.41 0.02 99.63
Girgentana GIR 24 24 0.36 0.36 0.004 96.55
Maltese from Sicily MAL 16 16 0.37 0.36 0.06 97.87
Sarda SAR 32 32 0.41 0.39 0.06 99.64
Maltese from Sardinia SAM 15 15 0.36 0.36 0.02 96.76
  1. * P < 0.05