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Table 2 Regional heritability (h2w) for bone traits, for windows of the genome that were significant at both the genome-wide (p < 0.05) and suggestive levels

From: Genome-wide association reveals QTL for growth, bone and in vivo carcass traits as assessed by computed tomography in Scottish Blackface lambs

  Chr Windows Start_position End_position LRTa H2w
Bone weight 6 12 30301209 36839547 9.38 0.05
6 13 33493183 39305012 12.46 0.06
6 14 36914376 41901628 11.34 0.06
19 1 286449 6216575 9.94 0.06
Bone weight accounting live weight 6 6 15078062 20110817 9.88 0.09
6 7 17621458 22303956 10.06 0.08
6 10 24995206 30283083 9.52 0.08
6 11 27872427 33467474 14.82 0.13
6 12 30301209 36839547 15 0.07
6 13 33493183 39305012 12.06 0.05
6 14 36914376 41901628 11.14 0.05
Bone area at ischium 6 9 22323737 27784139 10.92 0.11
6 10 24995206 30283083 23.68 0.12
6 11 27872427 33467474 26.2 0.13
6 12 30301209 36839547 26.6 0.10
6 13 33493183 39305012 29.06 0.08
6 14 36914376 41901628 28.94 0.08
6 15 39327441 44214759 14.94 0.07
Bone area at ischium accounting for live weight 6 10 24995206 30283083 18.48 0.09
6 11 27872427 33467474 21.1 0.09
6 12 30301209 36839547 21 0.08
6 13 33493183 39305012 20.68 0.06
6 14 36914376 41901628 21.32 0.06
6 15 39327441 44214759 11.48 0.06
Bone area at 5th lumbar vertebra accounting for live weight 6 5 12560057 17588020 9.14 0.08
6 6 15078062 20110817 11.38 0.10
6 7 17621458 22303956 11.6 0.08
Bone density at ischium 7 28 73086813 78504393 9.44 0.10
7 29 75173621 81259598 10.12 0.10
Bone density at ischium accounting for live weight 6 13 33493183 39305012 12.76 0.05
11 16 50499706 57193316 9.16 0.06
Bone density at 5th lumbar vertebra 12 9 23152711 28032557 10.94 0.07
12 10 25524368 30167375 10.56 0.08
24 7 20406106 28037384 9.92 0.08
24 8 24040495 31229367 15.98 0.11
Bone density at 8th thoracic vertebra 3 24 64458505 69730945 12.18 0.09
3 25 66881852 72060440 11.9 0.06
3 26 69775020 75107095 9.62 0.07
22 2 4058030 8888071 9.4 0.08
Bone density at 8th thoracic vertebra accounting for live weight 3 23 61850473 66786673 9.18 0.09
3 24 64458505 69730945 16.04 0.13
3 25 66881852 72060440 14.9 0.08
3 26 69775020 75107095 13.58 0.09
  1. Chr chromosome
  2. aThe genome-wide LRT threshold was equal to 13.54, corresponding to a p value less than 1.17 × 10−4 and the suggestive LRT threshold was equal to 9.27, corresponding to a p value less than 2.33 × 10−3