Fig. 3
From: Genome-wide prediction using Bayesian additive regression trees
Manhattan plots of the penalized regression coefficients from the LASSO, BLASSO, GBLUP and RKHS methods, VIMP (percent decrease in MSE) for RF, VIP (average number of node splits per iteration) for BART from the analyses of the Cleveland pig dataset. The five most important SNPs in the BART analysis are highlighted in different colors for comparison with the other plots