From: Assigning breed origin to alleles in crossbred animals
Scenarios | f ar | %correct | %incorrect | %unknown | >80 %assigned | |||
---|---|---|---|---|---|---|---|---|
Average | Max | Average | Max | Average | Max | |||
Chromosome 1 of BC animals | ||||||||
Closely-related breeds | 20 | 95.15 (0.37) | 99.99 (0.03) | 0.39 (0.02) | 2.99 (0.86) | 4.46 (0.37) | 22.38 (5.20) | 99.76 (0.22) |
0 | 92.42 (0.57) | 99.92 (0.12) | 0.36 (0.02) | 2.49 (0.36) | 7.22 (0.56) | 26.69 (4.16) | 98.43 (0.93) | |
Distantly-related breeds | 20 | 98.09 (0.09) | 100.00 (0.00) | 0.32 (0.02) | 2.12 (0.43) | 1.60 (0.08) | 9.56 (1.12) | 100.00 (0.00) |
0 | 97.92 (0.22) | 100.00 (0.00) | 0.30 (0.02) | 2.05 (0.46) | 1.77 (0.21) | 10.30 (1.27) | 100.00 (0.00) | |
Unrelated-breeds | 20 | 98.58 (0.13) | 100.00 (0.00) | 0.28 (0.04) | 1.59 (0.32) | 1.14 (0.11) | 7.56 (1.36) | 100.00 (0.00) |
0 | 98.58 (0.14) | 100.00 (0.00) | 0.28 (0.04) | 1.59 (0.32) | 1.14 (0.11) | 7.56 (1.36) | 100.00 (0.00) | |
Chromosome 2 of BC animals | ||||||||
Closely-related breeds | 20 | 94.05 (0.71) | 100.00 (0.00) | 0.47 (0.07) | 8.90 (3.33) | 5.48 (0.68) | 53.47 (8.84) | 93.33 (2.19) |
0 | 90.72 (1.32) | 100.00 (0.00) | 0.45 (0.05) | 8.91 (2.85) | 8.83 (1.31) | 66.96 (15.52) | 85.00 (2.75) | |
Distantly-related breeds | 20 | 97.62 (0.39) | 100.00 (0.00) | 0.38 (0.06) | 6.60 (1.68) | 2.00 (0.35) | 26.16 (5.80) | 99.32 (0.70) |
0 | 97.44 (0.39) | 100.00 (0.00) | 0.37 (0.06) | 6.33 (1.83) | 2.19 (0.35) | 29.22 (5.91) | 98.94 (0.73) | |
Unrelated breeds | 20 | 98.00 (0.48) | 100.00 (0.00) | 0.36 (0.11) | 4.25 (1.07) | 1.64 (0.42) | 26.03 (10.98) | 99.59 (0.53) |
0 | 98.00 (0.49) | 100.00 (0.00) | 0.35 (0.11) | 3.95 (0.74) | 1.65 (0.43) | 26.03 (10.98) | 99.57 (0.56) | |
Chromosome 1 of A(BC) animals | ||||||||
Closely-related breeds | 20 | 93.18 (0.43) | 99.77 (0.21) | 1.69 (0.10) | 8.96 (1.56) | 5.13 (0.41) | 19.71 (3.23) | 99.81 (0.24) |
0 | 88.91 (0.63) | 99.18 (0.58) | 1.58 (0.10) | 8.47 (1.33) | 9.51 (0.59) | 31.48 (3.78) | 96.14 (1.02) | |
Distantly-related breeds | 20 | 96.21 (0.16) | 99.93 (0.06) | 0.96 (0.09) | 4.98 (0.84) | 2.83 (0.11) | 11.46 (1.07) | 100.00 (0.00) |
0 | 95.92 (0.23) | 99.92 (0.05) | 0.95 (0.10) | 4.78 (0.67) | 3.13 (0.18) | 12.09 (0.96) | 100.00 (0.00) | |
Unrelated breeds | 20 | 96.99 (0.15) | 99.97 (0.03) | 0.68 (0.04) | 3.19 (0.72) | 2.33 (0.14) | 9.99 (1.83) | 100.00 (0.00) |
0 | 96.97 (0.15) | 99.97 (0.03) | 0.69 (0.04) | 3.21 (0.70) | 2.34 (0.14) | 10.14 (1.69) | 100.00 (0.00) | |
Chromosome 2 of A(BC) animals | ||||||||
Closely-related breeds | 20 | 91.64 (0.95) | 100.00 (0.00) | 1.99 (0.17) | 27.62 (6.67) | 6.37 (0.91) | 54.24 (10.13) | 92.45 (2.49) |
0 | 87.37 (1.55) | 100.00 (0.00) | 1.83 (0.17) | 24.18 (4.61) | 10.80 (1.47) | 66.40 (9.10) | 80.89 (4.28) | |
Distantly-related breeds | 20 | 95.51 (0.50) | 100.00 (0.00) | 1.14 (0.15) | 15.66 (4.72) | 3.35 (0.42) | 32.28 (8.57) | 98.57 (1.08) |
0 | 95.11 (0.48) | 100.00 (0.00) | 1.09 (0.15) | 16.16 (4.55) | 3.79 (0.39) | 33.51 (8.69) | 97.94 (1.06) | |
Unrelated breeds | 20 | 95.83 (0.65) | 100.00 (0.00) | 0.87 (0.14) | 11.28 (1.77) | 3.30 (0.59) | 32.24 (11.40) | 98.04 (1.16) |
0 | 95.78 (0.66) | 100.00 (0.00) | 0.87 (0.14) | 11.58 (1.62) | 3.35 (0.60) | 32.83 (11.53) | 98.00 (1.19) |