Table 4 Distribution of LoF and deleterious variants
Stop lost | Splice acceptor | Start lost | Frameshift | Missense deleterious | Stop gained | Splice donor | |
|---|---|---|---|---|---|---|---|
Holstein | 1 | 15 | 10 | 0 | 1 | 5 | 18 |
Abondance | 1 | 0 | 1 | 0 | 43 | 1 | 0 |
Cross-breed | 0 | 0 | 0 | 1 | 10 | 1 | 0 |
Brown Swiss | 0 | 6 | 1 | 0 | 4 | 3 | 3 |
Salers | 0 | 1 | 0 | 0 | 47 | 1 | 2 |
Montbéliarde | 1 | 1 | 3 | 0 | 705 | 34 | 18 |
Vosgienne | 0 | 4 | 0 | 0 | 4 | 9 | 3 |
Normande | 0 | 11 | 3 | 0 | 626 | 1 | 1 |
Simmental | 0 | 2 | 0 | 0 | 33 | 3 | 1 |
Limousine | 0 | 11 | 1 | 0 | 18 | 1 | 14 |
Charolaise | 1 | 15 | 6 | 5 | 17 | 35 | 21 |
Parthenaise | 0 | 0 | 0 | 0 | 1 | 9 | 2 |
Rouge des Prés | 1 | 1 | 0 | 0 | 37 | 3 | 1 |
Tarentaise | 0 | 1 | 0 | 0 | 54 | 0 | 0 |
Blonde d’Aquitaine | 2 | 13 | 3 | 1 | 572 | 31 | 16 |
Aubrac | 0 | 8 | 1 | 0 | 193 | 10 | 2 |