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Table 1 Reliabilities for five simulated traits from ten sources of genetic information

From: Selecting sequence variants to improve genomic predictions for dairy cattle

Trait Parent average 60 k 60 k + 24 kGWA 60 k + 24 kES 60 k + 24 kEV 60 k + 24 kG 60 k + 10 k QTL Only 10 k QTL 600 k 1.1 m genic
1 24.4 77.9 79.2 81.6 81.3 85.4 84.6 87.2 80.3 86.7
2 31.2 77.9 79.3 81.4 81.2 85.3 84.9 87.7 80.1 86.7
3 32.7 78.3 79.5 81.7 81.5 84.9 85.0 87.8 80.4 86.1
4 23.3 76.6 77.7 80.2 79.8 83.5 82.9 85.9 78.6 84.8
5 30.4 78.3 80.0 82.5 82.2 86.0 85.2 87.5 81.2 87.6
Average 28.4 77.8 79.2 81.5 81.2 85.0 84.5 87.2 80.1 86.4
  1. Reliabilities expressed as percentages; 24 k markers selected from 600 k SNPs by GWA p value, multiple regression effect size (ES) or effect variance (EV); 24 k markers selected from sequence SNPs in or near genes (G) by effect size; 600 k markers plus 500 k SNPs in or near genes (1.1 m genic) by effect size