Table 3 SNPs that are significantly associated with the three body principal components in Frizarta dairy ewes
SNP | Chra | Position | p value | −log10 (p value) | −log10 (p value) expected | p bBON | p cFDR | pved |
|---|---|---|---|---|---|---|---|---|
PC1, width dimension | ||||||||
OAR8_65677467.1 | 8 | 60857281 | 1.67E−05 | 4.778 | 4.936 | 0.028 | 0.028 | 0.040 |
s16706.1 | 25 | 40519001 | 1.91E−05 | 4.718 | 4.458 | 0.016 | 0.016 | 0.039 |
s75176.1 | 12 | 15687883 | 3.18E−05 | 4.498 | 4.237 | 0.045 | 0.045 | 0.037 |
s09443.1 | 25 | 26277908 | 6.34E−05 | 4.198 | 3.981 | 0.053 | 0.027 | 0.035 |
OAR20_41133825.1 | 20 | 37570240 | 3.97E−05 | 4.401 | 4.091 | 0.038 | 0.038 | 0.028 |
PC2, height dimension | ||||||||
s49406.1 | 11 | 27245550 | 1.96E−05 | 4.707 | 4.936 | 0.019 | 0.019 | 0.039 |
OAR23_33457070.1 | 23 | 31731118 | 2.58E−05 | 4.589 | 4.185 | 0.025 | 0.025 | 0.038 |
OAR10_65976077.1 | 10 | 63659341 | 4.03E−05 | 4.394 | 4.091 | 0.060 | 0.060 | 0.036 |
OAR9_32819540.1 | 9 | 31286828 | 2.10E−05 | 4.677 | 4.458 | 0.037 | 0.037 | 0.028 |
PC3, length dimension | ||||||||
s19829.1 | 3 | 168409560 | 0.32E−05 | 5.497 | 4.936 | 0.013 | 0.013 | 0.047 |
OAR19_41234161.1 | 19 | 39335737 | 0.99E−05 | 5.002 | 4.458 | 0.010 | 0.010 | 0.042 |