TY - JOUR AU - Wei, M. AU - Werf, J. H. J. PY - 1994 DA - 1994// TI - Maximizing genetic response in crossbreds using both purebred and crossbred information JO - Anim Sci VL - 59 ID - Wei1994 ER - TY - JOUR AU - Toosi, A. AU - Fernando, R. L. AU - Dekkers, J. C. M. PY - 2010 DA - 2010// TI - Genomic selection in admixed and crossbred populations JO - J Anim Sci VL - 88 UR - https://doi.org/10.2527/jas.2009-1975 DO - 10.2527/jas.2009-1975 ID - Toosi2010 ER - TY - JOUR AU - Christensen, O. F. AU - Madsen, P. AU - Nielsen, B. AU - Su, G. PY - 2014 DA - 2014// TI - Genomic evaluation of both purebred and crossbred performances JO - Genet Sel Evol VL - 46 UR - https://doi.org/10.1186/1297-9686-46-23 DO - 10.1186/1297-9686-46-23 ID - Christensen2014 ER - TY - JOUR AU - Ibánẽz-Escriche, N. AU - Fernando, R. L. AU - Toosi, A. AU - Dekkers, J. C. PY - 2009 DA - 2009// TI - Genomic selection of purebreds for crossbred performance JO - Genet Sel Evol VL - 41 UR - https://doi.org/10.1186/1297-9686-41-12 DO - 10.1186/1297-9686-41-12 ID - Ibánẽz-Escriche2009 ER - TY - JOUR AU - Dekkers, J. C. M. PY - 2007 DA - 2007// TI - Marker-assisted selection for commercial crossbred performance JO - J Anim Sci VL - 85 UR - https://doi.org/10.2527/jas.2006-683 DO - 10.2527/jas.2006-683 ID - Dekkers2007 ER - TY - JOUR AU - Zeng, J. AU - Toosi, A. AU - Fernando, R. L. AU - Dekkers, J. C. AU - Garrick, D. J. PY - 2013 DA - 2013// TI - Genomic selection of purebred animals for crossbred performance in the presence of dominant gene action JO - Genet Sel Evol VL - 45 UR - https://doi.org/10.1186/1297-9686-45-11 DO - 10.1186/1297-9686-45-11 ID - Zeng2013 ER - TY - JOUR AU - Lourenco, D. A. L. AU - Tsuruta, S. AU - Fragomeni, B. O. AU - Chen, C. Y. AU - Herring, W. O. AU - Misztal, I. PY - 2016 DA - 2016// TI - Crossbreed evaluations in single-step genomic best linear unbiased predictor using adjusted realized relationship matrices JO - J Anim Sci VL - 94 UR - https://doi.org/10.2527/jas.2015-9748 DO - 10.2527/jas.2015-9748 ID - Lourenco2016 ER - TY - JOUR AU - Hidalgo, A. M. AU - Bastiaansen, J. W. M. AU - Lopes, M. S. AU - Harlizius, B. AU - Groenen, M. A. M. AU - Koning, D. -. J. PY - 2015 DA - 2015// TI - Accuracy of predicted genomic breeding values in purebred and crossbred pigs JO - G3 (Bethesda) VL - 5 UR - https://doi.org/10.1534/g3.115.018119 DO - 10.1534/g3.115.018119 ID - Hidalgo2015 ER - TY - JOUR AU - Karoui, S. AU - Carabaño, M. J. AU - Díaz, C. AU - Legarra, A. PY - 2012 DA - 2012// TI - Joint genomic evaluation of French dairy cattle breeds using multiple-trait models JO - Genet Sel Evol VL - 44 UR - https://doi.org/10.1186/1297-9686-44-39 DO - 10.1186/1297-9686-44-39 ID - Karoui2012 ER - TY - JOUR AU - Wientjes, Y. C. AU - Veerkamp, R. F. AU - Bijma, P. AU - Bovenhuis, H. AU - Schrooten, C. AU - Calus, M. P. PY - 2015 DA - 2015// TI - Empirical and deterministic accuracies of across-population genomic prediction JO - Genet Sel Evol VL - 47 UR - https://doi.org/10.1186/s12711-014-0086-0 DO - 10.1186/s12711-014-0086-0 ID - Wientjes2015 ER - TY - JOUR AU - Esfandyari, H. AU - Sørensen, A. C. AU - Bijma, P. PY - 2015 DA - 2015// TI - A crossbred reference population can improve the response to genomic selection for crossbred performance JO - Genet Sel Evol VL - 47 UR - https://doi.org/10.1186/s12711-015-0155-z DO - 10.1186/s12711-015-0155-z ID - Esfandyari2015 ER - TY - JOUR AU - Daetwyler, H. D. AU - Villanueva, B. AU - Woolliams, J. A. PY - 2008 DA - 2008// TI - Accuracy of predicting the genetic risk of disease using a genome-wide approach JO - PLoS One VL - 3 UR - https://doi.org/10.1371/journal.pone.0003395 DO - 10.1371/journal.pone.0003395 ID - Daetwyler2008 ER - TY - JOUR AU - Goddard, M. E. AU - Hayes, B. J. AU - Meuwissen, T. H. E. PY - 2011 DA - 2011// TI - Using the genomic relationship matrix to predict the accuracy of genomic selection JO - J Anim Breed Genet VL - 128 UR - https://doi.org/10.1111/j.1439-0388.2011.00964.x DO - 10.1111/j.1439-0388.2011.00964.x ID - Goddard2011 ER - TY - JOUR AU - Wientjes, Y. C. J. AU - Bijma, P. AU - Veerkamp, R. F. AU - Calus, M. P. L. PY - 2016 DA - 2016// TI - An equation to predict the accuracy of genomic values by combining data from multiple traits, populations, or environments JO - Genetics VL - 202 UR - https://doi.org/10.1534/genetics.115.183269 DO - 10.1534/genetics.115.183269 ID - Wientjes2016 ER - TY - JOUR AU - VanRaden, P. M. PY - 2008 DA - 2008// TI - Efficient methods to compute genomic predictions JO - J Dairy Sci VL - 91 UR - https://doi.org/10.3168/jds.2007-0980 DO - 10.3168/jds.2007-0980 ID - VanRaden2008 ER - TY - JOUR AU - Vitezica, Z. G. AU - Varona, L. AU - Elsen, J. M. AU - Misztal, I. AU - Herring, W. AU - Legarra, A. PY - 2016 DA - 2016// TI - Genomic BLUP including additive and dominant variation in purebreds and F1 crossbreds, with an application in pigs JO - Genet Sel Evol VL - 48 UR - https://doi.org/10.1186/s12711-016-0185-1 DO - 10.1186/s12711-016-0185-1 ID - Vitezica2016 ER - TY - BOOK AU - Henderson, C. R. PY - 1984 DA - 1984// TI - Applications of linear models in animal breeding PB - University of Guelph CY - Guelph ID - Henderson1984 ER - TY - JOUR AU - de los Campos, G. AU - Hickey, J. M. AU - Pong-Wong, R. AU - Daetwyler, H. D. AU - Calus, M. P. L. PY - 2012 DA - 2012// TI - Whole-genome regression and prediction methods applied to plant and animal breeding JO - Genetics VL - 193 UR - https://doi.org/10.1534/genetics.112.143313 DO - 10.1534/genetics.112.143313 ID - de los Campos2012 ER - TY - JOUR AU - Henderson, C. R. PY - 1975 DA - 1975// TI - Best linear unbiased estimation and prediction under a selection model JO - Biometrics VL - 31 UR - https://doi.org/10.2307/2529430 DO - 10.2307/2529430 ID - Henderson1975 ER - TY - JOUR AU - Powell, J. E. AU - Visscher, P. M. AU - Goddard, M. E. PY - 2010 DA - 2010// TI - Reconciling the analysis of IBD and IBS in complex trait studies JO - Nat Rev Genet VL - 11 UR - https://doi.org/10.1038/nrg2865 DO - 10.1038/nrg2865 ID - Powell2010 ER - TY - JOUR AU - Sargolzaei, M. AU - Schenkel, F. S. PY - 2009 DA - 2009// TI - QMSim: a large-scale genome simulator for livestock JO - Bioinformatics VL - 25 UR - https://doi.org/10.1093/bioinformatics/btp045 DO - 10.1093/bioinformatics/btp045 ID - Sargolzaei2009 ER - TY - BOOK AU - Calus, M. P. L. AU - Vandenplas, J. PY - 2016 DA - 2016// TI - Calc_grm—a program to compute pedigree, genomic, and combined relationship matrices PB - ABGC, Wageningen UR Livestock Research CY - Wageningen ID - Calus2016 ER - TY - JOUR AU - Goddard, M. E. PY - 2009 DA - 2009// TI - Genomic selection: prediction of accuracy and maximisation of long term response JO - Genetica VL - 136 UR - https://doi.org/10.1007/s10709-008-9308-0 DO - 10.1007/s10709-008-9308-0 ID - Goddard2009 ER - TY - JOUR AU - Uimari, P. AU - Tapio, M. PY - 2011 DA - 2011// TI - Extent of linkage disequilibrium and effective population size in Finnish Landrace and Finnish Yorkshire pig breeds JO - J Anim Sci VL - 89 UR - https://doi.org/10.2527/jas.2010-3249 DO - 10.2527/jas.2010-3249 ID - Uimari2011 ER - TY - JOUR AU - Lin, Z. AU - Hayes, B. J. AU - Daetwyler, H. D. PY - 2014 DA - 2014// TI - Genomic selection in crops, trees and forages: a review JO - Crop Pasture Sci VL - 65 UR - https://doi.org/10.1071/CP13363 DO - 10.1071/CP13363 ID - Lin2014 ER - TY - JOUR AU - Sevillano, C. A. AU - Vandenplas, J. AU - Bastiaansen, J. W. M. AU - Calus, M. P. L. PY - 2016 DA - 2016// TI - Empirical determination of breed-of-origin of alleles in three-breed cross pigs JO - Genet Sel Evol VL - 48 UR - https://doi.org/10.1186/s12711-016-0234-9 DO - 10.1186/s12711-016-0234-9 ID - Sevillano2016 ER - TY - JOUR AU - Vandenplas, J. AU - Calus, M. P. L. AU - Sevillano, C. A. AU - Windig, J. J. AU - Bastiaansen, J. W. M. PY - 2016 DA - 2016// TI - Assigning breed origin to alleles in crossbred animals JO - Genet Sel Evol VL - 48 UR - https://doi.org/10.1186/s12711-016-0240-y DO - 10.1186/s12711-016-0240-y ID - Vandenplas2016 ER - TY - BOOK AU - Mrode, R. A. PY - 2005 DA - 2005// TI - Linear models for the prediction of animal breeding values PB - CABI Publishing CY - Wallingford UR - https://doi.org/10.1079/9780851990002.0000 DO - 10.1079/9780851990002.0000 ID - Mrode2005 ER - TY - JOUR AU - Strandén, I. AU - Garrick, D. J. PY - 2009 DA - 2009// TI - Technical note: derivation of equivalent computing algorithms for genomic predictions and reliabilities of animal merit JO - J Dairy Sci VL - 92 UR - https://doi.org/10.3168/jds.2008-1929 DO - 10.3168/jds.2008-1929 ID - Strandén2009 ER - TY - JOUR AU - Dekkers, J. C. M. PY - 1992 DA - 1992// TI - Asymptotic response to selection on best linear unbiased predictors of breeding values JO - Anim Sci VL - 54 ID - Dekkers1992 ER - TY - JOUR AU - Bijma, P. PY - 2012 DA - 2012// TI - Accuracies of estimated breeding values from ordinary genetic evaluations do not reflect the correlation between true and estimated breeding values in selected populations JO - J Anim Breed Genet VL - 129 UR - https://doi.org/10.1111/j.1439-0388.2012.00991.x DO - 10.1111/j.1439-0388.2012.00991.x ID - Bijma2012 ER - TY - JOUR AU - Grevenhof, E. M. AU - Arendonk, J. A. AU - Bijma, P. PY - 2012 DA - 2012// TI - Response to genomic selection: the Bulmer effect and the potential of genomic selection when the number of phenotypic records is limiting JO - Genet Sel Evol VL - 44 UR - https://doi.org/10.1186/1297-9686-44-26 DO - 10.1186/1297-9686-44-26 ID - Grevenhof2012 ER - TY - JOUR AU - Gorjanc, G. AU - Bijma, P. AU - Hickey, J. M. PY - 2015 DA - 2015// TI - Reliability of pedigree-based and genomic evaluations in selected populations JO - Genet Sel Evol VL - 47 UR - https://doi.org/10.1186/s12711-015-0145-1 DO - 10.1186/s12711-015-0145-1 ID - Gorjanc2015 ER - TY - JOUR AU - Aguilar, I. AU - Misztal, I. AU - Johnson, D. L. AU - Legarra, A. AU - Tsuruta, S. AU - Lawlor, T. J. PY - 2010 DA - 2010// TI - Hot topic: a unified approach to utilize phenotypic, full pedigree, and genomic information for genetic evaluation of Holstein final score JO - J Dairy Sci VL - 93 UR - https://doi.org/10.3168/jds.2009-2730 DO - 10.3168/jds.2009-2730 ID - Aguilar2010 ER - TY - JOUR AU - Christensen, O. F. AU - Lund, M. S. PY - 2010 DA - 2010// TI - Genomic prediction when some animals are not genotyped JO - Genet Sel Evol VL - 42 UR - https://doi.org/10.1186/1297-9686-42-2 DO - 10.1186/1297-9686-42-2 ID - Christensen2010 ER - TY - JOUR AU - Legarra, A. AU - Christensen, O. F. AU - Aguilar, I. AU - Misztal, I. PY - 2014 DA - 2014// TI - Single step, a general approach for genomic selection JO - Livest Sci VL - 166 UR - https://doi.org/10.1016/j.livsci.2014.04.029 DO - 10.1016/j.livsci.2014.04.029 ID - Legarra2014 ER - TY - JOUR AU - Roos, A. P. W. AU - Hayes, B. J. AU - Spelman, R. J. AU - Goddard, M. E. PY - 2008 DA - 2008// TI - Linkage disequilibrium and persistence of phase in Holstein-Friesian, Jersey and Angus cattle JO - Genetics VL - 179 UR - https://doi.org/10.1534/genetics.107.084301 DO - 10.1534/genetics.107.084301 ID - Roos2008 ER - TY - JOUR AU - Grevenhof, I. E. AU - Werf, J. H. PY - 2015 DA - 2015// TI - Design of reference populations for genomic selection in crossbreeding programs JO - Genet Sel Evol VL - 47 UR - https://doi.org/10.1186/s12711-015-0104-x DO - 10.1186/s12711-015-0104-x ID - Grevenhof2015 ER - TY - JOUR AU - Daetwyler, H. D. AU - Pong-Wong, R. AU - Villanueva, B. AU - Woolliams, J. A. PY - 2010 DA - 2010// TI - The impact of genetic architecture on genome-wide evaluation methods JO - Genetics VL - 185 UR - https://doi.org/10.1534/genetics.110.116855 DO - 10.1534/genetics.110.116855 ID - Daetwyler2010 ER - TY - JOUR AU - Brard, S. AU - Ricard, A. PY - 2015 DA - 2015// TI - Is the use of formulae a reliable way to predict the accuracy of genomic selection? JO - J Anim Breed Genet VL - 132 UR - https://doi.org/10.1111/jbg.12123 DO - 10.1111/jbg.12123 ID - Brard2015 ER -