From: Locally epistatic models for genome-wide prediction and association by importance sampling
Dataset | Number of individuals | Number of SNPs | Traits | Mean depth | Nrules | Nsplits | Proprow | Propcol |
---|---|---|---|---|---|---|---|---|
Rice | 299 | 73K | PH, FLW, LG, GRL, GRW, 1000GW, YLD | 4 | 500 | 5 | .3 | .1 |
Mouse | 1940 | 12K | Body weight, growth slope | 2000 | 10 | .1 | .05 | |
Maize | 4676 | 125K | GDD_DTS | 2 | 1000 | 10 | .1 | .05 |
GDD_DTA, GDD_ASI, DTS | 2 | 200 | 40 (using hotspots) | .1 | .05 | |||
DTA, ASI, PH, EH | ||||||||
PH.EH, EHdivPH, PHdivDTR | ||||||||
Wheat | 337 | 3355 | FD, PMD, PH, YLD, WGP | 1 | 500 | 2 | .3 | .1 |
HD, WAX |