Table 1 Haplotype counts in the critical mapping region (SNP names and chromosome positions are in Additional file 1: Table S2a)
Haplotype | Curly animals | Straight-haired animals | Total | ||||
|---|---|---|---|---|---|---|---|
Number of haplotypes | Heterozygous state | Homozygous state | Number of haplotypes | Heterozygous state | Homozygous state | ||
GGAGAGAAAA | 57 | 35 | 22 | 0 | 0 | 0 | 57 |
AGAGGGGCGG | 12 | 12 | 0 | 17 | 9 | 8 | 29 |
AGAGGGAAAA | 6 | 6 | 0 | 3 | 3 | 0 | 9 |
AAAGGAAAAA | 3 | 3 | 0 | 2 | 2 | 0 | 5 |
AGAGAGGCGG | 3 | 3 | 0 | 2 | 2 | 0 | 5 |
AGAGGGAAAG | 3 | 3 | 0 | 2 | 2 | 0 | 5 |
GGAGAAACGA | 4 | 4 | 0 | 0 | 0 | 0 | 4 |
AGAAGAGCGG | 3 | 3 | 0 | 1 | 1 | 0 | 4 |
AAAGGGAAAA | 2 | 2 | 0 | 1 | 1 | 0 | 3 |
AGAAAGACGG | 1 | 1 | 0 | 2 | 2 | 0 | 3 |
GGAGAGGCGG | 0 | 0 | 0 | 2 | 2 | 0 | 2 |
AGAGAAAAAA | 0 | 0 | 0 | 2 | 2 | 0 | 2 |
AGAGAGAAAA | 2 | 2 | 0 | 0 | 0 | 0 | 2 |
AGAGGAAAAG | 1 | 1 | 0 | 1 | 1 | 0 | 2 |
AGAGGAACGA | 1 | 1 | 0 | 1 | 1 | 0 | 2 |
AGGAGAGCGG | 2 | 2 | 0 | 0 | 0 | 0 | 2 |
Four rare haplotypes | 2 | 2 | 0 | 2 | 2 | 0 | 4 |
Total | 102 | 80 | 22 | 38 | 33 | 5 | 140 |