Table 3 Estimation of genomic inbreeding coefficients with models using different numbers of HBD classes (from 1 to 4) with pre-defined R k rates that correspond to the expected length in Morgans of HBD segments and with the LD panel
From: Age-based partitioning of individual genomic inbreeding levels in Belgian Blue cattle
Number of fitted HBD classes | Mean FG | Correlation with reference F aG | Predefined R k rates used for each HBD class | ||
|---|---|---|---|---|---|
1st HBD class | 2nd HBD class | 3rd HBD class | |||
1 | 0.058 | 0.967 | 20 | ||
1 | 0.056 | 0.963 | 16 | ||
2 | 0.060 | 0.996 | 10 | 100 | |
2 | 0.061 | 0.994 | 16 | 256 | |
3 | 0.061 | 0.996 | 8 | 64 | 256 |