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Table 2 Percentage of VNN challenged sea bass with correctly predicted survival status for pedigree-based (PBLUP) and genomic prediction methods

From: Genome-wide association and genomic prediction of resistance to viral nervous necrosis in European sea bass (Dicentrarchus labrax) using RAD sequencing

Replication

PBLUP

rrBLUP

Bayes A

Bayes B

Bayes C

1st

0.63

0.67

0.70

0.71

0.67

2nd

0.62

0.66

0.69

0.70

0.67

3rd

0.62

0.67

0.70

0.69

0.68

4th

0.62

0.66

0.70

0.70

0.68

5th

0.62

0.67

0.70

0.70

0.69

Mean

0.62

0.67

0.70

0.70

0.68

  1. Values obtained using area under curve (AUC) from ROC curves
  2. Five replicates of sixfold cross-validation