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Table 2 Accuracy, power, false positive rate and positive predictive value (PPV) for the SMA and MLM analyses with the NCHR method of finding thresholds in the ADMX population

From: Genome-wide mapping of quantitative trait loci in admixed populations using mixed linear model and Bayesian multiple regression analysis

 

SMA

SMABC

MLM

MLMBC

Accuracy

0.86 (0.003)

0.87 (0.005)

0.86 (0.005)

0.87 (0.004)

Power

0.40 (0.027)

0.63 (0.038)

0.40 (0.049)

0.64 (0.035)

False positive rate

0.08 (0.003)

0.10 (0.007)

0.08 (0.006)

0.11 (0.006)

PPV

0.34 (0.016)

0.43 (0.014)

0.36 (0.031)

0.43 (0.012)

  1. Numbers in brackets are SE of means