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Table 3 Pearson correlations between − log10 p values of the three models for direct and indirect SNP effects for each cross

From: The genetic architecture of socially-affected traits: a GWAS for direct and indirect genetic effects on survival time in laying hens showing cannibalism

Effect

Cross

STM-RMM.t

STM-GLMM

RMM.t-GLMM

Direct

W1 * WA

0.98

0.96

0.97

W1 * WB

0.97

0.93

0.93

W1 * WC

0.96

0.96

0.93

Indirect

W1 * WA

0.98

0.95

0.96

W1 * WB

0.98

0.97

0.96

W1 * WC

0.97

0.97

0.96

  1. All standard errors were less than 0.01