Fig. 6
From: Accuracy of imputation to whole-genome sequence in sheep
Mean empirical imputation accuracy of whole-genome sequence genotypes across target sets (MER, PD and F1) based on the Minimac3 (MM012) most likely genotypes and the Minimac3 allele dosage probability (MMprob) on six chromosomes (OAR1, 5, 10, 15, 20, 25). Imputation was implemented using a mixed European and non-European breed reference set (ALL). a provides imputation accuracy before imposing any Minimac3 R2 threshold to filter the imputed sequence data, while b provides imputation accuracy after applying a threshold of Minimac3 R2 > 0.4. Imputation accuracy was measured as the correlation between imputed and observed sequence genotypes