Table 2 Imputation accuracy of whole-genome sequence genotypes in three minor allele frequency (MAF) bands in a Merino target population, using a mixed breed reference set (‘ALL’)
From: Accuracy of imputation to whole-genome sequence in sheep
MAF band | FIa | MM012b | MMprobc |
|---|---|---|---|
0.01–0.02d | 0.856 | 0.858 | 0.886 |
0.02–0.03 | 0.871 | 0.877 | 0.902 |
0.03–0.04 | 0.883 | 0.889 | 0.913 |
0.05–0.06 | 0.892 | 0.898 | 0.920 |
0.06–0.07 | 0.902 | 0.906 | 0.927 |
0.06–0.08 | 0.913 | 0.916 | 0.936 |
0.08–0.10 | 0.922 | 0.923 | 0.942 |
0.10–0.50 | 0.927 | 0.922 | 0.945 |