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Table 4 Significant SNPs according to Bonferroni correction for direct genetic effects on body weight recorded at different ages

From: Genome-wide associations and detection of potential candidate genes for direct genetic and maternal genetic effects influencing dairy cattle body weight at different ages

SNP

Chr

Position

Ref allele

Effect

BW0

BW23

BW1314

Phen

dDRP

Phen

dDRP

Phen

dDRP

INRA-658

3

29627982

A

     

Xc

BTB-01695573

4

10794285

C

+

Xb

Xb

    

ARS-BFGL-NGS-3933

5

105695909

G

 

Xa

    

Hapmap47397-BTA-74925

5

105744830

A

Xab

Xab

   

Xac

Hapmap60480-ss46526970

5

105870613

C

Xab

Xab

 

Xac

Xac

Xac

ARS-BFGL-NGS-39379

5

106269362

G

Xab

Xab

  

Xc

Xac

ARS-BFGL-NGS-10732

5

106780606

G

    

Xac

Xac

Hapmap57466-rs29018274

5

107362671

A

+

 

Xa

 

Xa

 

Xa

ARS-BFGL-NGS-5139

7

92474466

A

+

 

Xb

    

ARS-BFGL-NGS-107035

7

93007435

A

+

Xb

Xab

    

ARS-BFGL-NGS-109285

18

57589121

A

+

 

Xb

  

Xac

Xac

ARS-BFGL-NGS-109317

29

49906123

A

+

Xb

     

ARS-BFGL-NGS-40378

29

50296573

A

+

Xb

Xb

    
  1. BW0: body weight recorded at birth; BW23: body weight recorded at 2 to 3 month of age; BW1314: body weight recorded at 13 to 14 months of age
  2. The indicated significant SNPs are from runs that consider the following similarity matrices: athe genomic relationship matrix \({\mathbf{G}}\), bLOCO + CHR_PC20 and cLOCO + CHR_PC10