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Table 1 Top variants for milk yield and composition trait QTL

From: Multiple QTL underlie milk phenotypes at the CSF2RB locus

Phenotype

Top variant

Location

Gene

Beta

SE

P

FY (kg/day)

rs466308089

75,957,201

IL2RB

− 0.015

0.003

2.40 × 10−8

PY (kg/day)

rs108985709

76,157,976

ELFN2

0.004

0.001

1.05 × 10−8

MY (L/day)

rs208473130

75,685,770

NCF4

0.216

0.021

6.64 × 10−25

FC (%)

rs379739117

75,786,436

RPL7

− 0.055

0.004

3.27 × 10−41

PC (%)

rs208375076

75,651,326

NCF4

− 0.035

0.002

7.28 × 10−83

  1. Phenotypes are daily yields for fat (FY), protein (PY), and milk (MY); and composition (percentage) phenotypes for fat (FC) and protein (PC). Locations on chromosome 5 are shown for the UMD 3.1 reference genome. The gene column indicates the nearest gene annotated in the UCSC genome browser for the bosTau8 assembly