Table 1 Number of SNPs per array and number of genotyped animals after genotype filtering per breed and array
Number of genotyped animals per breed and array | Number of SNPs per array | Total | |||
|---|---|---|---|---|---|
HD | IDBv1 | IDBv2 | IDBv3 | ||
774,959 | 16,044 | 16,291 | 53,368 | ||
Aberdeen Angus | 532 | 1969 | 5409 | 14,926 | 22,836 |
Charolais | 1,035 | 3950 | 10,868 | 23,619 | 39,472 |
Hereford | 362 | 1759 | 2825 | 7,732 | 12,678 |
Limousin | 1043 | 4134 | 10,717 | 30,071 | 45,965 |
Simmental | 417 | 820 | 1798 | 8739 | 11,774 |
Total | 3389 | 12632 | 31,617 | 85,087 | 132,725 |