TY - JOUR AU - Ascherio, A. AU - Rimm, E. B. AU - Giovannucci, E. L. AU - Spiegelman, D. AU - Stampfer, M. AU - Willett, W. C. PY - 1996 DA - 1996// TI - Dietary fat and risk of coronary heart disease in men: cohort follow up study in the United States JO - BMJ VL - 313 UR - https://doi.org/10.1136/bmj.313.7049.84 DO - 10.1136/bmj.313.7049.84 ID - Ascherio1996 ER - TY - JOUR AU - Mensink, R. P. AU - Zock, P. L. AU - Kester, A. D. AU - Katan, M. B. PY - 2003 DA - 2003// TI - Effects of dietary fatty acids and carbohydrates on the ratio of serum total to HDL cholesterol and on serum lipids and apolipoproteins: a meta-analysis of 60 controlled trials JO - Am J Clin Nutr VL - 77 UR - https://doi.org/10.1093/ajcn/77.5.1146 DO - 10.1093/ajcn/77.5.1146 ID - Mensink2003 ER - TY - JOUR AU - Givens, D. I. PY - 2010 DA - 2010// TI - Milk and meat in our diet: good or bad for health? JO - Animal VL - 4 UR - https://doi.org/10.1017/S1751731110001503 DO - 10.1017/S1751731110001503 ID - Givens2010 ER - TY - JOUR AU - Stoop, W. M. AU - Arendonk, J. A. AU - Heck, J. M. AU - Valenberg, H. J. AU - Bovenhuis, H. PY - 2008 DA - 2008// TI - Genetic parameters for major milk fatty acids and milk production traits of Dutch Holstein-Friesians JO - J Dairy Sci VL - 91 UR - https://doi.org/10.3168/jds.2007-0181 DO - 10.3168/jds.2007-0181 ID - Stoop2008 ER - TY - JOUR AU - Krag, K. AU - Poulsen, N. A. AU - Larsen, M. K. AU - Larsen, L. B. AU - Janss, L. L. AU - Buitenhuis, B. PY - 2013 DA - 2013// TI - Genetic parameters for milk fatty acids in Danish Holstein cattle based on SNP markers using a Bayesian approach JO - BMC Genet VL - 14 UR - https://doi.org/10.1186/1471-2156-14-79 DO - 10.1186/1471-2156-14-79 ID - Krag2013 ER - TY - JOUR AU - Hayes, B. J. AU - Bowman, P. J. AU - Chamberlain, A. J. AU - Goddard, M. E. PY - 2009 DA - 2009// TI - Invited review: genomic selection in dairy cattle: progress and challenges JO - J Dairy Sci VL - 92 UR - https://doi.org/10.3168/jds.2008-1646 DO - 10.3168/jds.2008-1646 ID - Hayes2009 ER - TY - JOUR AU - Boichard, D. AU - Brochard, M. PY - 2012 DA - 2012// TI - New phenotypes for new breeding goals in dairy cattle JO - Animal VL - 6 UR - https://doi.org/10.1017/S1751731112000018 DO - 10.1017/S1751731112000018 ID - Boichard2012 ER - TY - JOUR AU - Lund, M. S. AU - Su, G. AU - Janss, L. AU - Guldbrandtsen, B. AU - Brøndum, R. F. PY - 2014 DA - 2014// TI - Genomic evaluation of cattle in a multi-breed context JO - Livest Sci VL - 166 UR - https://doi.org/10.1016/j.livsci.2014.05.008 DO - 10.1016/j.livsci.2014.05.008 ID - Lund2014 ER - TY - JOUR AU - Berg, I. AU - Bowman, P. J. AU - MacLeod, I. M. AU - Hayes, B. J. AU - Wang, T. AU - Bolormaa, S. PY - 2017 DA - 2017// TI - Multi-breed genomic prediction using Bayes R with sequence data and dropping variants with a small effect JO - Genet Sel Evol VL - 49 UR - https://doi.org/10.1186/s12711-017-0347-9 DO - 10.1186/s12711-017-0347-9 ID - Berg2017 ER - TY - JOUR AU - Zhou, L. AU - Ding, X. AU - Zhang, Q. AU - Wang, Y. AU - Lund, M. S. AU - Su, G. PY - 2013 DA - 2013// TI - Consistency of linkage disequilibrium between Chinese and Nordic Holsteins and genomic prediction for Chinese Holsteins using a joint reference population JO - Genet Sel Evol VL - 45 UR - https://doi.org/10.1186/1297-9686-45-7 DO - 10.1186/1297-9686-45-7 ID - Zhou2013 ER - TY - JOUR AU - Li, X. AU - Buitenhuis, A. J. AU - Lund, M. S. AU - Li, C. AU - Sun, D. AU - Zhang, Q. PY - 2015 DA - 2015// TI - Joint genome-wide association study for milk fatty acid traits in Chinese and Danish Holstein populations JO - J Dairy Sci VL - 98 UR - https://doi.org/10.3168/jds.2015-9383 DO - 10.3168/jds.2015-9383 ID - Li2015 ER - TY - JOUR AU - Brøndum, R. F. AU - Su, G. AU - Janss, L. AU - Sahana, G. AU - Guldbrandtsen, B. AU - Boichard, D. PY - 2015 DA - 2015// TI - Quantitative trait loci markers derived from whole genome sequence data increases the reliability of genomic prediction JO - J Dairy Sci VL - 98 UR - https://doi.org/10.3168/jds.2014-9005 DO - 10.3168/jds.2014-9005 ID - Brøndum2015 ER - TY - JOUR AU - MacLeod, I. M. AU - Bowman, P. J. AU - Vander Jagt, C. J. AU - Haile-Mariam, M. AU - Kemper, K. E. AU - Chamberlain, A. J. PY - 2016 DA - 2016// TI - Exploiting biological priors and sequence variants enhances QTL discovery and genomic prediction of complex traits JO - BMC Genomics VL - 17 UR - https://doi.org/10.1186/s12864-016-2443-6 DO - 10.1186/s12864-016-2443-6 ID - MacLeod2016 ER - TY - JOUR AU - Edwards, S. M. AU - Sørensen, I. F. AU - Sarup, P. AU - Mackay, T. F. AU - Sørensen, P. PY - 2016 DA - 2016// TI - Genomic prediction for quantitative traits is improved by mapping variants to gene ontology categories in Drosophila melanogaster JO - Genetics VL - 203 UR - https://doi.org/10.1534/genetics.116.187161 DO - 10.1534/genetics.116.187161 ID - Edwards2016 ER - TY - JOUR AU - Sarup, P. AU - Jensen, J. AU - Ostersen, T. AU - Henryon, M. AU - Sørensen, P. PY - 2016 DA - 2016// TI - Increased prediction accuracy using a genomic feature model including prior information on quantitative trait locus regions in purebred Danish Duroc pigs JO - BMC Genet VL - 17 UR - https://doi.org/10.1186/s12863-015-0322-9 DO - 10.1186/s12863-015-0322-9 ID - Sarup2016 ER - TY - JOUR AU - Spindel, J. E. AU - Begum, H. AU - Akdemir, D. AU - Collard, B. AU - Redoña, E. AU - Jannink, J. L. PY - 2016 DA - 2016// TI - Genome-wide prediction models that incorporate de novo GWAS are a powerful new tool for tropical rice improvement JO - Heredity (Edinb) VL - 116 UR - https://doi.org/10.1038/hdy.2015.113 DO - 10.1038/hdy.2015.113 ID - Spindel2016 ER - TY - JOUR AU - Roos, A. P. AU - Hayes, B. J. AU - Spelman, R. J. AU - Goddard, M. E. PY - 2008 DA - 2008// TI - Linkage disequilibrium and persistence of phase in Holstein-Friesian, Jersey and Angus cattle JO - Genetics VL - 179 UR - https://doi.org/10.1534/genetics.107.084301 DO - 10.1534/genetics.107.084301 ID - Roos2008 ER - TY - JOUR AU - Bouwman, A. C. AU - Bovenhuis, H. AU - Visker, M. H. AU - Arendonk, J. A. PY - 2011 DA - 2011// TI - Genome-wide association of milk fatty acids in Dutch dairy cattle JO - BMC Genet VL - 12 UR - https://doi.org/10.1186/1471-2156-12-43 DO - 10.1186/1471-2156-12-43 ID - Bouwman2011 ER - TY - JOUR AU - Bouwman, A. C. AU - Visker, M. H. AU - Arendonk, J. A. AU - Bovenhuis, H. PY - 2012 DA - 2012// TI - Genomic regions associated with bovine milk fatty acids in both summer and winter milk samples JO - BMC Genet VL - 13 UR - https://doi.org/10.1186/1471-2156-13-93 DO - 10.1186/1471-2156-13-93 ID - Bouwman2012 ER - TY - JOUR AU - Gebreyesus, G. AU - Buitenhuis, A. J. AU - Poulsen, N. A. AU - Visker, M. H. P. W. AU - Zhang, Q. AU - Valenberg, H. J. F. PY - 2019 DA - 2019// TI - Multi-population GWAS and enrichment analyses reveal novel genomic regions and promising candidate genes underlying bovine milk fatty acid composition JO - BMC Genomics VL - 20 UR - https://doi.org/10.1186/s12864-019-5573-9 DO - 10.1186/s12864-019-5573-9 ID - Gebreyesus2019 ER - TY - JOUR AU - Li, C. AU - Sun, D. AU - Zhang, S. AU - Wang, S. AU - Wu, X. AU - Zhang, Q. PY - 2014 DA - 2014// TI - Genome wide association study identifies 20 novel promising genes associated with milk fatty acid traits in Chinese Holstein JO - PLoS One VL - 9 UR - https://doi.org/10.1371/journal.pone.0096186 DO - 10.1371/journal.pone.0096186 ID - Li2014 ER - TY - JOUR AU - Ntambi, J. M. AU - Miyazaki, M. PY - 2003 DA - 2003// TI - Recent insights into stearoyl-CoA desaturase-1 JO - Curr Opin Lipidol VL - 14 UR - https://doi.org/10.1097/00041433-200306000-00005 DO - 10.1097/00041433-200306000-00005 ID - Ntambi2003 ER - TY - JOUR AU - Mele, M. AU - Conte, G. AU - Castiglioni, B. AU - Chessa, S. AU - Macciotta, N. P. AU - Serra, A. PY - 2007 DA - 2007// TI - Stearoyl-coenzyme A desaturase gene polymorphism and milk fatty acid composition in Italian Holsteins JO - J Dairy Sci VL - 90 UR - https://doi.org/10.3168/jds.2006-617 DO - 10.3168/jds.2006-617 ID - Mele2007 ER - TY - JOUR AU - Schennink, A. AU - Stoop, W. M. AU - Visker, M. H. AU - Heck, J. M. AU - Bovenhuis, H. AU - Poel, J. J. PY - 2007 DA - 2007// TI - DGAT1 underlies large genetic variation in milk-fat composition of dairy cows JO - Anim Genet VL - 38 UR - https://doi.org/10.1111/j.1365-2052.2007.01635.x DO - 10.1111/j.1365-2052.2007.01635.x ID - Schennink2007 ER - TY - JOUR AU - Schennink, A. AU - Heck, J. M. AU - Bovenhuis, H. AU - Visker, M. H. AU - Valenberg, H. J. AU - Arendonk, J. A. PY - 2008 DA - 2008// TI - Milk fatty acid unsaturation: genetic parameters and effects of stearoyl-CoA desaturase (SCD1) and acyl CoA: diacylglycerol acyltransferase 1 (DGAT1) JO - J Dairy Sci VL - 91 UR - https://doi.org/10.3168/jds.2007-0825 DO - 10.3168/jds.2007-0825 ID - Schennink2008 ER - TY - JOUR AU - Bovenhuis, H. AU - Visker, M. H. P. W. AU - Poulsen, N. A. AU - Sehested, J. AU - Valenberg, H. J. F. AU - Arendonk, J. A. M. PY - 2016 DA - 2016// TI - Effects of the diacylglycerol o-acyltransferase 1 (DGAT1) K232A polymorphism on fatty acid, protein, and mineral composition of dairy cattle milk JO - J Dairy Sci VL - 99 UR - https://doi.org/10.3168/jds.2015-10462 DO - 10.3168/jds.2015-10462 ID - Bovenhuis2016 ER - TY - JOUR AU - Pegolo, S. AU - Cecchinato, A. AU - Mele, M. AU - Conte, G. AU - Schiavon, S. AU - Bittante, G. PY - 2016 DA - 2016// TI - Effects of candidate gene polymorphisms on the detailed fatty acids profile determined by gas chromatography in bovine milk JO - J Dairy Sci VL - 99 UR - https://doi.org/10.3168/jds.2015-10420 DO - 10.3168/jds.2015-10420 ID - Pegolo2016 ER - TY - JOUR AU - VanRaden, P. M. PY - 2008 DA - 2008// TI - Efficient methods to compute genomic predictions JO - J Dairy Sci VL - 91 UR - https://doi.org/10.3168/jds.2007-0980 DO - 10.3168/jds.2007-0980 ID - VanRaden2008 ER - TY - STD TI - Sørensen P, Edwards SM, Jensen P. Genomic feature models. In: Proceedings of the 10th world congress on genetics applied to livestock production: 17–22 August 2014. Vancouver; 2014. ID - ref29 ER - TY - JOUR AU - Bovenhuis, H. AU - Visker, M. H. AU - Valenberg, H. J. AU - Buitenhuis, A. J. AU - Arendonk, J. A. PY - 2015 DA - 2015// TI - Effects of the DGAT1 polymorphism on test-day milk production traits throughout lactation JO - J Dairy Sci VL - 98 UR - https://doi.org/10.3168/jds.2015-9564 DO - 10.3168/jds.2015-9564 ID - Bovenhuis2015 ER - TY - JOUR AU - Poulsen, N. A. AU - Gustavsson, F. AU - Glantz, M. AU - Paulsson, M. AU - Larsen, L. B. AU - Larsen, M. K. PY - 2012 DA - 2012// TI - The influence of feed and herd on fatty acid composition in 3 dairy breeds (Danish Holstein, Danish Jersey, and Swedish Red) JO - J Dairy Sci VL - 95 UR - https://doi.org/10.3168/jds.2012-5820 DO - 10.3168/jds.2012-5820 ID - Poulsen2012 ER - TY - JOUR AU - Gebreyesus, G. AU - Lund, M. S. AU - Janss, L. AU - Poulsen, N. A. AU - Larsen, L. B. AU - Bovenhuis, H. PY - 2016 DA - 2016// TI - Short communication: multi-trait estimation of genetic parameters for milk protein composition in the Danish Holstein JO - J Dairy Sci VL - 99 UR - https://doi.org/10.3168/jds.2015-10501 DO - 10.3168/jds.2015-10501 ID - Gebreyesus2016 ER - TY - JOUR AU - Duchemin, S. I. AU - Visker, M. H. AU - Arendonk, J. A. AU - Bovenhuis, H. PY - 2014 DA - 2014// TI - A quantitative trait locus on Bos taurus autosome 17 explains a large proportion of the genetic variation in de novo synthesized milk fatty acids JO - J Dairy Sci VL - 97 UR - https://doi.org/10.3168/jds.2014-8178 DO - 10.3168/jds.2014-8178 ID - Duchemin2014 ER - TY - STD TI - Madsen P, Jensen J. A user’s guide to DMU. A package for analyzing multivariate mixed models. Version 6, release 4.7; 2007. http://dmu.agrsci.dk. UR - http://dmu.agrsci.dk ID - ref34 ER - TY - JOUR AU - Wilmink, J. B. M. PY - 1987 DA - 1987// TI - Adjustment of test-day milk, fat and protein yield for age, season and stage of lactation JO - Livest Prod Sci VL - 16 UR - https://doi.org/10.1016/0301-6226(87)90003-0 DO - 10.1016/0301-6226(87)90003-0 ID - Wilmink1987 ER - TY - JOUR AU - Purcell, S. AU - Neale, B. AU - Todd-Brown, K. AU - Thomas, L. AU - Ferreira, M. A. AU - Bender, D. PY - 2007 DA - 2007// TI - PLINK: a tool set for whole-genome association and population-based linkage analyses JO - Am J Hum Genet VL - 81 UR - https://doi.org/10.1086/519795 DO - 10.1086/519795 ID - Purcell2007 ER - TY - JOUR AU - Daetwyler, H. D. AU - Villanueva, B. AU - Woolliams, J. A. PY - 2008 DA - 2008// TI - Accuracy of predicting the genetic risk of disease using a genome-wide approach JO - PLoS One VL - 3 UR - https://doi.org/10.1371/journal.pone.0003395 DO - 10.1371/journal.pone.0003395 ID - Daetwyler2008 ER - TY - JOUR AU - Goddard, M. PY - 2009 DA - 2009// TI - Genomic selection: prediction of accuracy and maximisation of long-term response JO - Genetica VL - 136 UR - https://doi.org/10.1007/s10709-008-9308-0 DO - 10.1007/s10709-008-9308-0 ID - Goddard2009 ER - TY - JOUR AU - Hayes, B. J. AU - Pryce, J. AU - Chamberlain, A. J. AU - Bowman, P. J. AU - Goddard, M. E. PY - 2010 DA - 2010// TI - Genetic architecture of complex traits and accuracy of genomic prediction: coat colour, milk-fat percentage, and type in Holstein cattle as contrasting model traits JO - PLoS Genet VL - 6 UR - https://doi.org/10.1371/journal.pgen.1001139 DO - 10.1371/journal.pgen.1001139 ID - Hayes2010 ER - TY - JOUR AU - Roos, A. P. AU - Hayes, B. J. AU - Goddard, M. E. PY - 2009 DA - 2009// TI - Reliability of genomic predictions across multiple populations JO - Genetics VL - 183 UR - https://doi.org/10.1534/genetics.109.104935 DO - 10.1534/genetics.109.104935 ID - Roos2009 ER - TY - JOUR AU - Lund, M. S. AU - Roos, A. P. AU - Vries, A. G. AU - Druet, T. AU - Ducrocq, V. AU - Fritz, S. PY - 2011 DA - 2011// TI - A common reference population from four European Holstein populations increases reliability of genomic predictions JO - Genet Sel Evol VL - 43 UR - https://doi.org/10.1186/1297-9686-43-43 DO - 10.1186/1297-9686-43-43 ID - Lund2011 ER - TY - JOUR AU - Zhou, L. AU - Lund, M. S. AU - Wang, Y. AU - Su, G. PY - 2014 DA - 2014// TI - Genomic predictions across Nordic Holstein and Nordic Red using the genomic best linear unbiased prediction model with different genomic relationship matrices JO - J Anim Breed Genet VL - 131 UR - https://doi.org/10.1111/jbg.12089 DO - 10.1111/jbg.12089 ID - Zhou2014 ER - TY - JOUR AU - Wientjes, Y. C. AU - Veerkamp, R. F. AU - Bijma, P. AU - Bovenhuis, H. AU - Schrooten, C. AU - Calus, M. P. PY - 2015 DA - 2015// TI - Empirical and deterministic accuracies of across-population genomic prediction JO - Genet Sel Evol VL - 47 UR - https://doi.org/10.1186/s12711-014-0086-0 DO - 10.1186/s12711-014-0086-0 ID - Wientjes2015 ER - TY - JOUR AU - Erbe, M. AU - Hayes, B. J. AU - Matukumalli, L. K. AU - Goswami, S. AU - Bowman, P. J. AU - Reich, C. M. PY - 2012 DA - 2012// TI - Improving accuracy of genomic predictions within and between dairy cattle breeds with imputed high-density single nucleotide polymorphism panels JO - J Dairy Sci VL - 95 UR - https://doi.org/10.3168/jds.2011-5019 DO - 10.3168/jds.2011-5019 ID - Erbe2012 ER - TY - JOUR AU - Brøndum, R. F. AU - Su, G. AU - Lund, M. S. AU - Bowman, P. J. AU - Goddard, M. E. AU - Hayes, B. J. PY - 2012 DA - 2012// TI - Genome position specific priors for genomic prediction JO - BMC Genomics VL - 13 UR - https://doi.org/10.1186/1471-2164-13-543 DO - 10.1186/1471-2164-13-543 ID - Brøndum2012 ER - TY - JOUR AU - Gebreyesus, G. AU - Lund, M. S. AU - Buitenhuis, B. AU - Bovenhuis, H. AU - Poulsen, N. A. AU - Janss, L. G. PY - 2017 DA - 2017// TI - Modeling heterogeneous (co)variances from adjacent-SNP groups improves genomic prediction for milk protein composition traits JO - Genet Sel Evol VL - 49 UR - https://doi.org/10.1186/s12711-017-0364-8 DO - 10.1186/s12711-017-0364-8 ID - Gebreyesus2017 ER - TY - JOUR AU - Zhang, Z. AU - Ober, U. AU - Erbe, M. AU - Zhang, H. AU - Gao, N. AU - He, J. PY - 2014 DA - 2014// TI - Improving the accuracy of whole genome prediction for complex traits using the results of genome wide association studies JO - PLoS One VL - 9 UR - https://doi.org/10.1371/journal.pone.0093017 DO - 10.1371/journal.pone.0093017 ID - Zhang2014 ER - TY - JOUR AU - Ulbricht, T. L. AU - Southgate, D. A. PY - 1991 DA - 1991// TI - Coronary heart disease: seven dietary factors JO - Lancet VL - 338 UR - https://doi.org/10.1016/0140-6736(91)91846-M DO - 10.1016/0140-6736(91)91846-M ID - Ulbricht1991 ER -