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Table 3 Functional annotations of variants included in the 59 QTL regions

From: Sequence-based GWAS, network and pathway analyses reveal genes co-associated with milk cheese-making properties and milk composition in Montbéliarde cows

Functional annotation

Number of variants

%

Intergenic

3081

41.7

Intronic

2972

40.2

Upstream

604

8.2

Downstream

584

7.9

3′ UTR

26

0.35

5′ UTR

10

0.14

Synonymous

65

0.88

Missense

51

0.69

Total

7393

100

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Genetics Selection Evolution

ISSN: 1297-9686