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Table 4 Genomic correlations calculated using additive effects of the 736 SNPs selected by the AWM (above the diagonal) and genetic correlations estimated from pedigree or taken from Sanchez et al. [3] (below the diagonal)

From: Sequence-based GWAS, network and pathway analyses reveal genes co-associated with milk cheese-making properties and milk composition in Montbéliarde cows

 

CYFRESH

CYDM

CYFAT-PROT

K10/RCTPCC

aPCC

K10/RCTSC

aSC

a2SC

PC

FC

C18:1

UFA

PUFA

Ca

Mg

P

CYFRESH

 

1.00

− 0.87

− 0.84

0.25

− 0.84

0.52

0.85

0.84

0.96

− 0.82

− 0.78

− 0.80

0.70

0.52

0.83

CYDM

0.97

 

− 0.88

− 0.85

0.27

− 0.85

0.55

0.86

0.85

0.95

− 0.80

− 0.76

− 0.78

0.71

0.55

0.84

CYFAT-PROT

− 0.82

− 0.84

 

0.79

− 0.61

0.84

− 0.73

− 0.79

− 0.72

− 0.72

0.57

0.51

0.58

− 0.55

− 0.54

− 0.75

K10/RCTPCC

− 0.72

− 0.73

0.65

 

− 0.31

0.99

− 0.69

− 0.99

− 0.98

− 0.74

0.57

0.52

0.44

− 0.80

− 0.75

− 0.86

aPCC

0.77

0.78

− 0.65

− 0.76

 

− 0.41

0.79

0.29

0.20

0.01

0.08

0.14

0.02

− 0.12

0.29

0.35

K10/RCTSC

− 0.74

− 0.76

0.71

0.80

− 0.78

 

− 0.75

− 0.98

− 0.95

− 0.71

0.53

0.47

0.41

− 0.75

− 0.76

− 0.87

aSC

0.76

0.78

− 0.67

− 0.73

0.76

− 0.77

 

0.63

0.64

0.32

− 0.19

− 0.14

− 0.15

0.36

0.72

0.62

a2SC

0.72

0.75

− 0.64

− 0.72

0.77

− 0.77

0.74

 

0.97

0.75

− 0.59

− 0.53

− 0.45

0.79

0.68

0.87

PC

0.74

0.75

− 0.52

− 0.80

0.94

− 0.81

0.91

0.89

 

0.77

− 0.59

− 0.55

− 0.46

0.84

0.76

0.86

FC

0.91

0.87

− 0.57

− 0.53

0.55

− 0.47

0.51

0.48

0.60

 

− 0.89

− 0.87

− 0.87

0.69

0.41

0.75

C18:1

− 0.38

− 0.45

0.22

0.20

− 0.22

0.13

− 0.18

− 0.17

− 0.23

− 0.57

 

0.99

0.93

− 0.52

− 0.19

− 0.56

UFA

− 0.34

− 0.40

0.17

0.13

− 0.14

0.05

− 0.10

− 0.09

− 0.21

− 0.55

0.47

 

0.93

− 0.50

− 0.16

− 0.51

PUFA

− 0.47

− 0.42

0.30

0.00

− 0.02

− 0.04

0.01

0.04

− 0.29

− 0.59

0.71

0.74

 

− 0.42

− 0.13

− 0.50

Ca

0.41

0.40

− 0.25

− 0.46

0.45

− 0.37

0.39

0.42

0.41

0.26

− 0.30

− 0.30

− 0.35

 

0.76

0.71

Mg

0.54

0.58

− 0.44

− 0.58

0.59

− 0.58

0.54

0.54

0.40

0.20

− 0.25

− 0.25

− 0.05

0.60

 

0.70

P

0.40

0.41

− 0.31

− 0.54

0.50

− 0.53

0.42

0.40

0.40

0.29

− 0.31

− 0.30

− 0.39

0.34

0.58