IHNV resistance phenotypea | Methodb | Number of families | Phenotyped fish | Genotypedc | Sliding 1-Mb windows | Genetic parameterf | ||||
---|---|---|---|---|---|---|---|---|---|---|
SNPsd | Fishd | \(\sigma_{g}^{2}\) | \(\sigma_{f/d}^{2}\) | \(\sigma_{e}^{2}\) | \(h^{2}\) | |||||
DAYS | PBLUP | 100 | 4987 | n.a.e | n.a. | n.a. | 9.44 ± 3.22 | 1.77 ± 1.05 | 17.06 ± 1.67 | 0.33 ± 0.10 |
ssGBLUP | 100 | 4987 | 35,397 | 1044 | 1414 | 6.35 ± 1.25 | 2.40 ± 0.77 | 18.58 ± 0.72 | 0.23 ± 0.04 | |
STATUS | PBLUP | 100 | 4987 | n.a. | n.a. | n.a. | 2.22 ± 17.41 | 0.29 ± 1.16 | 1.00 ± 0.04 | 0.28 ± 0.14 |
ssGBLUP | 100 | 4987 | 35,397 | 1044 | 1414 | 0.81 ± 0.23 | 0.19 ± 0.07 | 1.00 ± 0.03 | 0.25 ± 0.07 |