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Table 3 Combination of regulators (trios and quartets) in the list of 829 SNPs identified by the AWM procedure that spanned most of the network topology obtained by PCIT with minimum redundancy

From: Integrating genome-wide co-association and gene expression to identify putative regulators and predictors of feed efficiency in pigs

Combinations

Regulators

Number of target genes

Trios

COPS5-GTF2H5-RUNX1

521

COPS5-HDAC4-RUNX1

520

ESR1-SMARCA2-USP16

519

Quartets

COPS5- ESR1-GTF2F2- USP16

613

COPS5- ESR1-RUNX1- WT1

603

COPS5- GTF2F2- HDAC4- USP16

603

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Genetics Selection Evolution

ISSN: 1297-9686